Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02165 ATGAAGGTTCCCAAGTTTGTACAATTTTTCCAGACATTGTATTGTCATGTAGAATCGATAGGGGTTCAATCATCTGAGGCTTCTCTTGGCTCTTTGTATGATTTGCAGTGTCGTGTTGACTTGTCAACTCGAGAAGTGAATTTTGACAAGTACTCTGACGCTAAGGAGAAGATGGCCACCGTACCAGGGCAACTCATATGGGAGATCGTGAAGAGGAACAACTCATTTTTGGTGAAGGAGTTCGGTAACGGCACTGCCAGCGTGCAGTTTAGCAAAGAGAGCAACAATCTCTACAACCTTAACACTTTCAAGTACTCCGGTTTGGCAAACAAGAAAACTGTTACTATTCAACCTGCTGGTAAGGATCAGTCTGTGTTGCTGGCAACTACCAAGACGAAGAAACAGAACAAGCCTGCTAGTTTGCTTCACAAATCAGTCATGAAGAAGGAGTTCAGGAGGATGGCGAATGCAGTGGCAAACCAGGTGGCAAATAACCACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTAATAGGAGCCTCAAAGTTGCGAAGTCTGGCGTCAAGAAGAGGAACAGACAGGCTACAAAGATCCGTGGTAGGAAGTG 623 0.4543 MKVPKFVQFFQTLYCHVESIGVQSSEASLGSLYDLQCRVDLSTREVNFDKYSDAKEKMATVPGQLIWEIVKRNNSFLVKEFGNGTASVQFSKESNNLYNLNTFKYSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFRRMANAVANQVANNHYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQATKIRGRK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02165 207 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 58 207 - -
Bva08g02165 207 PANTHER 60S RIBOSOMAL PROTEIN L28 58 207 IPR002672 GO:0003735|GO:0005840|GO:0006412
Bva08g02165 207 Pfam Ribosomal L28e protein family 65 185 IPR029004 -
Bva08g02165 207 Gene3D - 63 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02165 Bva-Chr8 14257715 14260224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02165 58 200 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.825 1.29e-75 222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02165 08 14257715 14260224 Bva02g02317 02 22883035 22885498 BWGD
Bva08g02165 08 14257715 14260224 Bva02g02317 02 22883035 22885498 ECH
Bva08g02165 08 14257715 14260224 Bva08g02165 08 14257715 14260224 ECH