Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02156 ATGGAAAACTTTTGGAGCTCACAAGGAGGATTTTCATGGATCTGTGAAGGAGAATCTAATATGGCTTCTCTATGCATTCAAAGAACCATAATAGAAGCTGTGAATCTGTTTTTCCTTGGAATTTTCTGCCTTGTTTGGCTGATGCGTTTAGTTAGAAAACATCGTGAGAGTAACAGGGGTAGAAAGGATCGGGTTTGTGTTATCACTTCAGTCTGTTGCTCACTCATTAGCATTATGTATTTTGGTGTTTGTTTGTATAAATTCATAGCTCAAACTAATAAAGCAGATAACTTAAGTTGGGCAGTTTACATTGTCAGAGGACTAGTGTGGACCTCTTTTGCAGTTTCATTGCTTACTCAAATGCCCAAATGGATGACATTTGTGAACTCTGTTTGGTGGGTGTGCTTATGTCTGTTAGTTTCTGCTCTGAACATTGAAATCATTCTGAGAAAgcagaaaattcaaatgcttGATTTGCTGCCTTGGCCTGTGTGCTTCCTACTCCTCCTTTGTGCCTTCAGAAACCATGGCTACTTCGTTTCTAAACATTACCCAAATGACACAATGGTTGAGCCCTTGTTGGATGAGAAGGCCAGAAAGAAGCAAACAGGACTAAGCCACGCTAATCCTTTTAGCAGAATGACATTTTCTTGGATTAATCCTTTACTCTCTTTGGGTTACTCAAAGCCATTAGCTCTTGAAGACATACCTCCTCTGGATTCTGAGGACAAAGTTGACTCTTCCTACCAAAAATTTGCTAATGAATGGGACTCCTTGTTAACGGGCAGAAGCTCAAACAGTACCAAAAACTTGGTATTTTGGGCCATGGCAAGAGTTTTCTTGAAAGAGAATATATGCATAGCAATCTGTGCATTACTGAGGTCGACTTGTGGAGCTATTTCTCCTCTGATACTATATGCTTTTGTAAACTATTCAAATCGCAATGAAGACAACATACAAAAGGGTCTTGCTATAGTAGGATGCCTAATTCTAGCCAAATTAGTAGAGACTTGGTGTCAAAGGCACTGGTACTTCAACTCAAGGAGGTCAGGAATGAGAATGAGATCAGCTTTAATGGCGGCAGTCTACAGAAAGCTGCTAAAGCTTTCAAGTGTGGGAAGGAGAAGGCACTCAACTGGGGAGATTGTGAATTACATAGCCGTTGATGCCTACAGGATGGGAGAGTTCTTGTGGTGGTTCCATTCAGGATGGAGCCTTGCATTGCAACTTTTCTTAGCTATTGGTGTCCTTTTTTGGGTTGTGGGTCTTGGTGCTCTACCTGGTCTACTCATTCTTCTCATGTGTGGACTCTTTAATGTGCCATTCGCGCAGAAGCTGAAAAAGTGTCAATCAGAAGTCCTGGTTTCCCAAGATCAGAGACTTAGGTCAACTTCAGAGATCCTGAACAATATGAAACTCATTAAATTACAATCTTGGGAGGATGAATTTAAGAACTCGGTTGAATCACTTCGTGCTAGAGAGTTCAAATGGTTGCGGGAGACACAGTTCACAAAGGTTTATTGCTCAATgctttatttcctttctccaACCATTGTTTGCGCATTCATTCTCCTGGGATGCACCATCTTTGGAAGTGCCCCATTAAATGCTGGCACTGTCTTCACAGTTCTTGCAACGTTGAGGAGCATGGCAGAACCTGTCAAATATATACCACAGGCTCTTTCAgctatcatccaagttaatgTTTCGTTTGATAGGCTTAACACCTTTCTCCTTGATGACGAGATGAAAAGTTTAGAAACAAGTAGGATCTTGAGGACAAATTCAGATAAAAGCATCGAGATAACAGCAGCTAATTTCTCTTGGGATTGCGAATCATTGACCTTACCAACTTTGAGAGACGTCAGTCTAGACATAAAATGGGGGCAGAAAATAGCAGTTTGTGGGCCAGTAGGAGCTGGGAAGTCATCTCTTTTAAATGCTATCCTTGGAGAGATGCCTCACATCTCGGGAACTGTTAAAGTACATGGATCGGTAGCTTATGTTTCTCAAACTGCGTGGATCCAAAGTGGGACAATTCGTGACAACATACTCTATGGCAAGCCAATGGAAGAAAGTAGATATGAGAAGGTCATTAGAGCATGTGCTTTGGATAAGGATATCAGTGGTTTTAGCCATGGCGATCTTACAGAAATAGGTCAGAGAGGGCTTAACTTGAGTGGAGGACAGAAGCAGAGGATTCAACTTGCACGAGCTGTCTATAACGATGCTGATATATATCTCCTTGACGACCCCTTTAGTGCAGTAGATGCACATACTGCTTCAGTTCTGTTCCATGACTGTGTCATGAGTGCTCTCGGAGAGAAAACGATCATCCTGGTGACCCATCAAGTGGAATTTCTCTCGGAAGTTGACAAAATTCTgGTTATGGAGGGGGGTTGTATTGTTCAATCAGGAAGTTATGAGGAACTAAGGGCAATTGGGACAACGTTCGAACAACTTCTAAATGCTCATAGAGATGCTATAGCAGTACTGGATACACTCAATGAAAACCAGGGAATATCTCCAGAGGTAGATACAGCTAAACTGGTGGAACCTTATAGAAGTGATGGGGCTTATAAAAAGAGTGGTGGAGAAATTTGTATGCCTAATTTCCAAGGGGAACAACTAACACGAGAAGAACAGAGGGAGATGGGAGATTCTGGATGGAAACCATTCttggaatatatttttatctcggAAGGACTGCTTCTTCTGTTGTTAAGCTCATTAGCTCTGATTGGTTTTGTTGCTTTTCTGGCTGCGGCATCTTATTGGCTTGCTCTAGCTATTAAGATCCCAAAAATCAGTACTGGAACGCTCGTTGGAGTTTACTCTGGGTTATCAATTCTTAGTgctatttttgtttacttcAGGGCTTACTTTATAGCCCTTCTTGGATTAAAGGCTTCGAAAGCCTTTTTCTCTGGTTTTACGCATGCTATTTTCAATGCTCCCATGTCCTTCTTTGACTCCACTCCAGTTGGCCGGATTTTGACCCGAGCTTCATCAGATTTGGGTACTTTGGATATTGACATACCTTTTGCCATAACCTATGTTGCACATTCTATGGTAGAATTTCTAACAGGAATTGGGATTATGGCTTCAGTCACATGGCAAGTTCTGATAGTTGCCGTACTAGTTATAGTAGCTACCAAGTACATTAAGGACTACTATCAAGCCTCTGCCCGGGAACTAGTAAGGATCAATGGAACAACAAAGGCTCCAGTTGTGAATTATGCAACAGAGACATCAGCTGGAGTGGTCACCATAAGAGCTTTCAACATGATGGATAGATTCTTCCAAACTTACGTAAATCTGGTCGACACGGATGCTGCAACTTTCTTGCTTACTAACGCTGCCTTGGAGTGGTTACTATTGAGAATTGAAATGCTCCAGAATTTGGTCCTTTTCACGGCAGCTTTTCTGTTTGTACTACTTCCCAAGGGATACATAGCTCCAGGGCTTGTGGGACTGTCTCTGTCTTATGCACTGTCAATAGCAAAAACCAAGGTTTACTGTGTCCAGTGGTGTTGTAACTTAGAAAACTACATCATCTCTGTCGAACGAATAAAACAATTCATGCTGATACCAGAAGAGCCTCCAAAAATAGTGGAAGATAAAAGGCCACCATCTTCTTGGCCATCCGGGGGCAGGATAGAGTTGCAAAACTTGAAGGTTAGATATCGTCCAAATGCTCCATTGGTTCTCGATGGAATCACTTGCACTTTCAAAGAAGGGGCTAGAGTGGGAGTTGTAGGGAGGACCGGTAGTGGGAAAACTACACTCATAAGTGCATTGTTCCGTTTGGTAGAGCCAGCAAGTGGTGAAATTCTTATAGATGGGGTTAATATATGCTCAATAGGGCTGAAGGATTTAAGGATGAAGCTGAGCATCATCCCCCAAGAACCAATTCTTTTCAGGGGTAGCATCCGAACAAACTTGGATCCAGTAGGCCAATATTCCGATGATGAGATATGGAAGAGTTTAGAGAAGTGTCAGCTCAAAGAGGCAATAAGTAGTCTACCAAATCAGCTGGACTCACCAGTGAGTGATGAAGGTGAAAATTGGAGCGTGGGCCAAAGGCAATTGTTCTGTCTTGGAAGAGTTCTTCTCAAGAGAAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCGTTGATTCTGCCACAGATGCCATCTTACAGAGAATTATAAGACAAGAATTTTCAGAATGCACAGTTATAACAGTGGCTCATAGAGTTCCAACAGTAATAGACAGTGACATGGTCATGGTTCTCTCCTATGGAAAAATGGTGGAATTCGATGAGCCTTCAAAGCTAATAGAGTCCAACTCTTTATTCTCTAAACTGGTAGCTGAATATTGGTCCAGCTGCAATAAGAGTTGCTCCTA 4394 0.4122 MENFWSSQGGFSWICEGESNMASLCIQRTIIEAVNLFFLGIFCLVWLMRLVRKHRESNRGRKDRVCVITSVCCSLISIMYFGVCLYKFIAQTNKADNLSWAVYIVRGLVWTSFAVSLLTQMPKWMTFVNSVWWVCLCLLVSALNIEIILRKQKIQMLDLLPWPVCFLLLLCAFRNHGYFVSKHYPNDTMVEPLLDEKARKKQTGLSHANPFSRMTFSWINPLLSLGYSKPLALEDIPPLDSEDKVDSSYQKFANEWDSLLTGRSSNSTKNLVFWAMARVFLKENICIAICALLRSTCGAISPLILYAFVNYSNRNEDNIQKGLAIVGCLILAKLVETWCQRHWYFNSRRSGMRMRSALMAAVYRKLLKLSSVGRRRHSTGEIVNYIAVDAYRMGEFLWWFHSGWSLALQLFLAIGVLFWVVGLGALPGLLILLMCGLFNVPFAQKLKKCQSEVLVSQDQRLRSTSEILNNMKLIKLQSWEDEFKNSVESLRAREFKWLRETQFTKVYCSMLYFLSPTIVCAFILLGCTIFGSAPLNAGTVFTVLATLRSMAEPVKYIPQALSAIIQVNVSFDRLNTFLLDDEMKSLETSRILRTNSDKSIEITAANFSWDCESLTLPTLRDVSLDIKWGQKIAVCGPVGAGKSSLLNAILGEMPHISGTVKVHGSVAYVSQTAWIQSGTIRDNILYGKPMEESRYEKVIRACALDKDISGFSHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASVLFHDCVMSALGEKTIILVTHQVEFLSEVDKILVMEGGCIVQSGSYEELRAIGTTFEQLLNAHRDAIAVLDTLNENQGISPEVDTAKLVEPYRSDGAYKKSGGEICMPNFQGEQLTREEQREMGDSGWKPFLEYIFISEGLLLLLLSSLALIGFVAFLAAASYWLALAIKIPKISTGTLVGVYSGLSILSAIFVYFRAYFIALLGLKASKAFFSGFTHAIFNAPMSFFDSTPVGRILTRASSDLGTLDIDIPFAITYVAHSMVEFLTGIGIMASVTWQVLIVAVLVIVATKYIKDYYQASARELVRINGTTKAPVVNYATETSAGVVTIRAFNMMDRFFQTYVNLVDTDAATFLLTNAALEWLLLRIEMLQNLVLFTAAFLFVLLPKGYIAPGLVGLSLSYALSIAKTKVYCVQWCCNLENYIISVERIKQFMLIPEEPPKIVEDKRPPSSWPSGGRIELQNLKVRYRPNAPLVLDGITCTFKEGARVGVVGRTGSGKTTLISALFRLVEPASGEILIDGVNICSIGLKDLRMKLSIIPQEPILFRGSIRTNLDPVGQYSDDEIWKSLEKCQLKEAISSLPNQLDSPVSDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASVDSATDAILQRIIRQEFSECTVITVAHRVPTVIDSDMVMVLSYGKMVEFDEPSKLIESNSLFSKLVAEYWSSCNKSCS 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02156 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 824 IPR027417 -
Bva08g02156 1464 SMART AAA_5 1246 1439 IPR003593 -
Bva08g02156 1464 SMART AAA_5 628 801 IPR003593 -
Bva08g02156 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva08g02156 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 287 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva08g02156 1464 CDD ABC_6TM_ABCC_D2 924 1195 IPR044726 GO:0140359
Bva08g02156 1464 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Bva08g02156 1464 Gene3D ABC transporter type 1, transmembrane domain 871 1201 IPR036640 GO:0005524|GO:0016021
Bva08g02156 1464 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 54 1459 - -
Bva08g02156 1464 Pfam ABC transporter 1237 1385 IPR003439 GO:0005524
Bva08g02156 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1220 1454 IPR003439 GO:0005524
Bva08g02156 1464 Gene3D - 1203 1454 IPR027417 -
Bva08g02156 1464 Gene3D - 594 829 IPR027417 -
Bva08g02156 1464 Gene3D ABC transporter type 1, transmembrane domain 272 583 IPR036640 GO:0005524|GO:0016021
Bva08g02156 1464 Pfam ABC transporter transmembrane region 286 547 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva08g02156 1464 Pfam ABC transporter transmembrane region 938 1163 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva08g02156 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 54 1459 - -
Bva08g02156 1464 CDD ABCC_MRP_domain2 1218 1438 - -
Bva08g02156 1464 SUPERFAMILY ABC transporter transmembrane region 904 1202 IPR036640 GO:0005524|GO:0016021
Bva08g02156 1464 CDD ABCC_MRP_domain1 600 800 - -
Bva08g02156 1464 ProSitePatterns ABC transporters family signature. 726 740 IPR017871 GO:0005524
Bva08g02156 1464 SUPERFAMILY ABC transporter transmembrane region 273 580 IPR036640 GO:0005524|GO:0016021
Bva08g02156 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 824 IPR003439 GO:0005524
Bva08g02156 1464 Pfam ABC transporter 619 753 IPR003439 GO:0005524
Bva08g02156 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1453 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02156 Bva-Chr8 14203875 14210068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02156 600 815 Calmodulin-binding Proteins AT2G36910 28.261 3.70e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02156 - - pvy:116115789 1971.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02156 08 14203875 14210068 Bva08g02156 08 14203875 14210068 ECH