Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva08g02156 | ATGGAAAACTTTTGGAGCTCACAAGGAGGATTTTCATGGATCTGTGAAGGAGAATCTAATATGGCTTCTCTATGCATTCAAAGAACCATAATAGAAGCTGTGAATCTGTTTTTCCTTGGAATTTTCTGCCTTGTTTGGCTGATGCGTTTAGTTAGAAAACATCGTGAGAGTAACAGGGGTAGAAAGGATCGGGTTTGTGTTATCACTTCAGTCTGTTGCTCACTCATTAGCATTATGTATTTTGGTGTTTGTTTGTATAAATTCATAGCTCAAACTAATAAAGCAGATAACTTAAGTTGGGCAGTTTACATTGTCAGAGGACTAGTGTGGACCTCTTTTGCAGTTTCATTGCTTACTCAAATGCCCAAATGGATGACATTTGTGAACTCTGTTTGGTGGGTGTGCTTATGTCTGTTAGTTTCTGCTCTGAACATTGAAATCATTCTGAGAAAgcagaaaattcaaatgcttGATTTGCTGCCTTGGCCTGTGTGCTTCCTACTCCTCCTTTGTGCCTTCAGAAACCATGGCTACTTCGTTTCTAAACATTACCCAAATGACACAATGGTTGAGCCCTTGTTGGATGAGAAGGCCAGAAAGAAGCAAACAGGACTAAGCCACGCTAATCCTTTTAGCAGAATGACATTTTCTTGGATTAATCCTTTACTCTCTTTGGGTTACTCAAAGCCATTAGCTCTTGAAGACATACCTCCTCTGGATTCTGAGGACAAAGTTGACTCTTCCTACCAAAAATTTGCTAATGAATGGGACTCCTTGTTAACGGGCAGAAGCTCAAACAGTACCAAAAACTTGGTATTTTGGGCCATGGCAAGAGTTTTCTTGAAAGAGAATATATGCATAGCAATCTGTGCATTACTGAGGTCGACTTGTGGAGCTATTTCTCCTCTGATACTATATGCTTTTGTAAACTATTCAAATCGCAATGAAGACAACATACAAAAGGGTCTTGCTATAGTAGGATGCCTAATTCTAGCCAAATTAGTAGAGACTTGGTGTCAAAGGCACTGGTACTTCAACTCAAGGAGGTCAGGAATGAGAATGAGATCAGCTTTAATGGCGGCAGTCTACAGAAAGCTGCTAAAGCTTTCAAGTGTGGGAAGGAGAAGGCACTCAACTGGGGAGATTGTGAATTACATAGCCGTTGATGCCTACAGGATGGGAGAGTTCTTGTGGTGGTTCCATTCAGGATGGAGCCTTGCATTGCAACTTTTCTTAGCTATTGGTGTCCTTTTTTGGGTTGTGGGTCTTGGTGCTCTACCTGGTCTACTCATTCTTCTCATGTGTGGACTCTTTAATGTGCCATTCGCGCAGAAGCTGAAAAAGTGTCAATCAGAAGTCCTGGTTTCCCAAGATCAGAGACTTAGGTCAACTTCAGAGATCCTGAACAATATGAAACTCATTAAATTACAATCTTGGGAGGATGAATTTAAGAACTCGGTTGAATCACTTCGTGCTAGAGAGTTCAAATGGTTGCGGGAGACACAGTTCACAAAGGTTTATTGCTCAATgctttatttcctttctccaACCATTGTTTGCGCATTCATTCTCCTGGGATGCACCATCTTTGGAAGTGCCCCATTAAATGCTGGCACTGTCTTCACAGTTCTTGCAACGTTGAGGAGCATGGCAGAACCTGTCAAATATATACCACAGGCTCTTTCAgctatcatccaagttaatgTTTCGTTTGATAGGCTTAACACCTTTCTCCTTGATGACGAGATGAAAAGTTTAGAAACAAGTAGGATCTTGAGGACAAATTCAGATAAAAGCATCGAGATAACAGCAGCTAATTTCTCTTGGGATTGCGAATCATTGACCTTACCAACTTTGAGAGACGTCAGTCTAGACATAAAATGGGGGCAGAAAATAGCAGTTTGTGGGCCAGTAGGAGCTGGGAAGTCATCTCTTTTAAATGCTATCCTTGGAGAGATGCCTCACATCTCGGGAACTGTTAAAGTACATGGATCGGTAGCTTATGTTTCTCAAACTGCGTGGATCCAAAGTGGGACAATTCGTGACAACATACTCTATGGCAAGCCAATGGAAGAAAGTAGATATGAGAAGGTCATTAGAGCATGTGCTTTGGATAAGGATATCAGTGGTTTTAGCCATGGCGATCTTACAGAAATAGGTCAGAGAGGGCTTAACTTGAGTGGAGGACAGAAGCAGAGGATTCAACTTGCACGAGCTGTCTATAACGATGCTGATATATATCTCCTTGACGACCCCTTTAGTGCAGTAGATGCACATACTGCTTCAGTTCTGTTCCATGACTGTGTCATGAGTGCTCTCGGAGAGAAAACGATCATCCTGGTGACCCATCAAGTGGAATTTCTCTCGGAAGTTGACAAAATTCTgGTTATGGAGGGGGGTTGTATTGTTCAATCAGGAAGTTATGAGGAACTAAGGGCAATTGGGACAACGTTCGAACAACTTCTAAATGCTCATAGAGATGCTATAGCAGTACTGGATACACTCAATGAAAACCAGGGAATATCTCCAGAGGTAGATACAGCTAAACTGGTGGAACCTTATAGAAGTGATGGGGCTTATAAAAAGAGTGGTGGAGAAATTTGTATGCCTAATTTCCAAGGGGAACAACTAACACGAGAAGAACAGAGGGAGATGGGAGATTCTGGATGGAAACCATTCttggaatatatttttatctcggAAGGACTGCTTCTTCTGTTGTTAAGCTCATTAGCTCTGATTGGTTTTGTTGCTTTTCTGGCTGCGGCATCTTATTGGCTTGCTCTAGCTATTAAGATCCCAAAAATCAGTACTGGAACGCTCGTTGGAGTTTACTCTGGGTTATCAATTCTTAGTgctatttttgtttacttcAGGGCTTACTTTATAGCCCTTCTTGGATTAAAGGCTTCGAAAGCCTTTTTCTCTGGTTTTACGCATGCTATTTTCAATGCTCCCATGTCCTTCTTTGACTCCACTCCAGTTGGCCGGATTTTGACCCGAGCTTCATCAGATTTGGGTACTTTGGATATTGACATACCTTTTGCCATAACCTATGTTGCACATTCTATGGTAGAATTTCTAACAGGAATTGGGATTATGGCTTCAGTCACATGGCAAGTTCTGATAGTTGCCGTACTAGTTATAGTAGCTACCAAGTACATTAAGGACTACTATCAAGCCTCTGCCCGGGAACTAGTAAGGATCAATGGAACAACAAAGGCTCCAGTTGTGAATTATGCAACAGAGACATCAGCTGGAGTGGTCACCATAAGAGCTTTCAACATGATGGATAGATTCTTCCAAACTTACGTAAATCTGGTCGACACGGATGCTGCAACTTTCTTGCTTACTAACGCTGCCTTGGAGTGGTTACTATTGAGAATTGAAATGCTCCAGAATTTGGTCCTTTTCACGGCAGCTTTTCTGTTTGTACTACTTCCCAAGGGATACATAGCTCCAGGGCTTGTGGGACTGTCTCTGTCTTATGCACTGTCAATAGCAAAAACCAAGGTTTACTGTGTCCAGTGGTGTTGTAACTTAGAAAACTACATCATCTCTGTCGAACGAATAAAACAATTCATGCTGATACCAGAAGAGCCTCCAAAAATAGTGGAAGATAAAAGGCCACCATCTTCTTGGCCATCCGGGGGCAGGATAGAGTTGCAAAACTTGAAGGTTAGATATCGTCCAAATGCTCCATTGGTTCTCGATGGAATCACTTGCACTTTCAAAGAAGGGGCTAGAGTGGGAGTTGTAGGGAGGACCGGTAGTGGGAAAACTACACTCATAAGTGCATTGTTCCGTTTGGTAGAGCCAGCAAGTGGTGAAATTCTTATAGATGGGGTTAATATATGCTCAATAGGGCTGAAGGATTTAAGGATGAAGCTGAGCATCATCCCCCAAGAACCAATTCTTTTCAGGGGTAGCATCCGAACAAACTTGGATCCAGTAGGCCAATATTCCGATGATGAGATATGGAAGAGTTTAGAGAAGTGTCAGCTCAAAGAGGCAATAAGTAGTCTACCAAATCAGCTGGACTCACCAGTGAGTGATGAAGGTGAAAATTGGAGCGTGGGCCAAAGGCAATTGTTCTGTCTTGGAAGAGTTCTTCTCAAGAGAAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCGTTGATTCTGCCACAGATGCCATCTTACAGAGAATTATAAGACAAGAATTTTCAGAATGCACAGTTATAACAGTGGCTCATAGAGTTCCAACAGTAATAGACAGTGACATGGTCATGGTTCTCTCCTATGGAAAAATGGTGGAATTCGATGAGCCTTCAAAGCTAATAGAGTCCAACTCTTTATTCTCTAAACTGGTAGCTGAATATTGGTCCAGCTGCAATAAGAGTTGCTCCTA | 4394 | 0.4122 | MENFWSSQGGFSWICEGESNMASLCIQRTIIEAVNLFFLGIFCLVWLMRLVRKHRESNRGRKDRVCVITSVCCSLISIMYFGVCLYKFIAQTNKADNLSWAVYIVRGLVWTSFAVSLLTQMPKWMTFVNSVWWVCLCLLVSALNIEIILRKQKIQMLDLLPWPVCFLLLLCAFRNHGYFVSKHYPNDTMVEPLLDEKARKKQTGLSHANPFSRMTFSWINPLLSLGYSKPLALEDIPPLDSEDKVDSSYQKFANEWDSLLTGRSSNSTKNLVFWAMARVFLKENICIAICALLRSTCGAISPLILYAFVNYSNRNEDNIQKGLAIVGCLILAKLVETWCQRHWYFNSRRSGMRMRSALMAAVYRKLLKLSSVGRRRHSTGEIVNYIAVDAYRMGEFLWWFHSGWSLALQLFLAIGVLFWVVGLGALPGLLILLMCGLFNVPFAQKLKKCQSEVLVSQDQRLRSTSEILNNMKLIKLQSWEDEFKNSVESLRAREFKWLRETQFTKVYCSMLYFLSPTIVCAFILLGCTIFGSAPLNAGTVFTVLATLRSMAEPVKYIPQALSAIIQVNVSFDRLNTFLLDDEMKSLETSRILRTNSDKSIEITAANFSWDCESLTLPTLRDVSLDIKWGQKIAVCGPVGAGKSSLLNAILGEMPHISGTVKVHGSVAYVSQTAWIQSGTIRDNILYGKPMEESRYEKVIRACALDKDISGFSHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASVLFHDCVMSALGEKTIILVTHQVEFLSEVDKILVMEGGCIVQSGSYEELRAIGTTFEQLLNAHRDAIAVLDTLNENQGISPEVDTAKLVEPYRSDGAYKKSGGEICMPNFQGEQLTREEQREMGDSGWKPFLEYIFISEGLLLLLLSSLALIGFVAFLAAASYWLALAIKIPKISTGTLVGVYSGLSILSAIFVYFRAYFIALLGLKASKAFFSGFTHAIFNAPMSFFDSTPVGRILTRASSDLGTLDIDIPFAITYVAHSMVEFLTGIGIMASVTWQVLIVAVLVIVATKYIKDYYQASARELVRINGTTKAPVVNYATETSAGVVTIRAFNMMDRFFQTYVNLVDTDAATFLLTNAALEWLLLRIEMLQNLVLFTAAFLFVLLPKGYIAPGLVGLSLSYALSIAKTKVYCVQWCCNLENYIISVERIKQFMLIPEEPPKIVEDKRPPSSWPSGGRIELQNLKVRYRPNAPLVLDGITCTFKEGARVGVVGRTGSGKTTLISALFRLVEPASGEILIDGVNICSIGLKDLRMKLSIIPQEPILFRGSIRTNLDPVGQYSDDEIWKSLEKCQLKEAISSLPNQLDSPVSDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASVDSATDAILQRIIRQEFSECTVITVAHRVPTVIDSDMVMVLSYGKMVEFDEPSKLIESNSLFSKLVAEYWSSCNKSCS | 1464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva08g02156 | 1464 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 593 | 824 | IPR027417 | - | |
Bva08g02156 | 1464 | SMART | AAA_5 | 1246 | 1439 | IPR003593 | - | |
Bva08g02156 | 1464 | SMART | AAA_5 | 628 | 801 | IPR003593 | - | |
Bva08g02156 | 1464 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 907 | 1168 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva08g02156 | 1464 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 287 | 566 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva08g02156 | 1464 | CDD | ABC_6TM_ABCC_D2 | 924 | 1195 | IPR044726 | GO:0140359 | |
Bva08g02156 | 1464 | CDD | ABC_6TM_ABCC_D1 | 286 | 574 | IPR044746 | GO:0140359 | |
Bva08g02156 | 1464 | Gene3D | ABC transporter type 1, transmembrane domain | 871 | 1201 | IPR036640 | GO:0005524|GO:0016021 | |
Bva08g02156 | 1464 | PANTHER | NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED | 54 | 1459 | - | - | |
Bva08g02156 | 1464 | Pfam | ABC transporter | 1237 | 1385 | IPR003439 | GO:0005524 | |
Bva08g02156 | 1464 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1220 | 1454 | IPR003439 | GO:0005524 | |
Bva08g02156 | 1464 | Gene3D | - | 1203 | 1454 | IPR027417 | - | |
Bva08g02156 | 1464 | Gene3D | - | 594 | 829 | IPR027417 | - | |
Bva08g02156 | 1464 | Gene3D | ABC transporter type 1, transmembrane domain | 272 | 583 | IPR036640 | GO:0005524|GO:0016021 | |
Bva08g02156 | 1464 | Pfam | ABC transporter transmembrane region | 286 | 547 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva08g02156 | 1464 | Pfam | ABC transporter transmembrane region | 938 | 1163 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva08g02156 | 1464 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 54 | 1459 | - | - | |
Bva08g02156 | 1464 | CDD | ABCC_MRP_domain2 | 1218 | 1438 | - | - | |
Bva08g02156 | 1464 | SUPERFAMILY | ABC transporter transmembrane region | 904 | 1202 | IPR036640 | GO:0005524|GO:0016021 | |
Bva08g02156 | 1464 | CDD | ABCC_MRP_domain1 | 600 | 800 | - | - | |
Bva08g02156 | 1464 | ProSitePatterns | ABC transporters family signature. | 726 | 740 | IPR017871 | GO:0005524 | |
Bva08g02156 | 1464 | SUPERFAMILY | ABC transporter transmembrane region | 273 | 580 | IPR036640 | GO:0005524|GO:0016021 | |
Bva08g02156 | 1464 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 602 | 824 | IPR003439 | GO:0005524 | |
Bva08g02156 | 1464 | Pfam | ABC transporter | 619 | 753 | IPR003439 | GO:0005524 | |
Bva08g02156 | 1464 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1210 | 1453 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva08g02156 | Bva-Chr8 | 14203875 | 14210068 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva08g02156 | 600 | 815 | Calmodulin-binding Proteins | AT2G36910 | 28.261 | 3.70e-20 | 95.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva08g02156 | - | - | pvy:116115789 | 1971.44 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva08g02156 | 08 | 14203875 | 14210068 | Bva08g02156 | 08 | 14203875 | 14210068 | ECH |