Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02152 ATGGGAAAGCCTGAGCTTCTCCATGGAACAATTGAAGCCACCATTTTCAATGCCACACCTTACTCTTCAGCATTTCCTTTCAATTGTATATGTGTAAATGGCAAGCCTGCTTATGTTACCATCAAAATAGACAACAAGAAGGTGGCAAAGACGAGTGAGGAACACGACCGTGTCTGGAACCAGACCTTTCAGATTCAATGTGCTCATCCAGCTGATTCAATCATCACCATAACACTGAAAACAACATGCTCCGTATTGGGGAAATTCCACATCCAGGCTCAGCGGTTGTTGAAGGAAGAAAGTTTGATCAATGGTTTCTTTCCCCTCCACATGGAAAATGGAAAGCCAAACCCACAACTAAAGCTAAGGTTTTTATTATGGTTCAAGCCTGCAGAATTGGAACCGAGCTGGGCAAAGCTACTAAGCAGTGGGGAATATCAAGGCCTAAAGGAGGCTACATTTCCACAAAGGTCAAATTGTGAGGTCAAGCTTTACCATGATGCTCACCATTCTTCTACTTTTCAACCTCCTTTTAATATCTGTGGGGCTCCAAGAAATGTATGGGAAGATGTGTATAAAGCCATTGAGGGTGCAAAgtatcttatttatattgcaGGATGGTCCTTCAATCCCAAGATGGCACTGGTTAGAGATCCTCAAACAGAAATCCCACATGCAAGAGGAGTAAAGCTAGGTGACttattgaagaagaaagcagaGGAAGGTGTTGCAGTGAGGGTAATGCTTTGGGATGATGAAACTTCTTTGCCACTTATCAAGAACAAAGGTGTAATGAAAACCCATGATGAGGATTCTTTTGCTTATTTCAAACACACAAAAGTAATATGCAGGAAGTGTCCAAGATTGCACAATAAGTTCCCAACACTCTTTGCTCACCATCAGAAAACCATTAGTGTAGACACCAAAGTACCCAATTCTGTAAATGACAGAGAGATTATGAGTTTTGTTGGTGGGTTAGATTTGTGTGATGGCCGATATGATACAGAGCAACATTCATTGTTTCAAACACTTAACATGGAATCCCACTGTTATGATTTCTATCAGACAAATATCGCGGGAGCTAGCCTTAACAAAGGAGGGCCAAGAGAACCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAAGCAGCTTGGGATGTGTTAACCAACTTTGAGCAAAGATGGACTAAGCAATGTGATGCTTCCCTTTTAGTCCCTGCTACTACTTTAGCCAATCTCTTTCCCTCAAGCACAGTACCCTTTAAGAGGGATTGGAAAGTTCAAGTGTATAGGTCAATTGACCATGTCTCTGCTAGCCAATTTTTCAGAAAGTTGACTGTGGAAAGGAGCATCCACGACGCCTATGTTGAAGCAATTAGGCGTGCCGATAAGTTTATATACATAGAAAACCAGTATTTCATTGGGGGTTGTCATTTGTGGGAGAAAGACACGCACTGTGGCTGCAGAAATCTGATTCCTGTAGAGATTGCACTTAAGGTGGTTAGTAAGATTAAAGCAAAAGAGAGGTTTGCAGTGTACATTGTGATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATATTGCACTGGACAAGAGAAACAATGGCAATGATGTATAGGTTTATTGGAGAAGCTATACAAGAGAGTGGAGAACCAGGGCACCCAAGAGACTACTTGAATTTCTTCTGCCTTGCAAATAGGGAACCCGAGGGAAAACACGAATATCTTCCTCCACATTCTCCTCAGCCTCATACACAATACTGGAATGCCCAGAAAAACAGAAGGTTCATGGTTTACGTCCACTCCAAAATCATGATAGTGGACGACATATACATTCTGATAGGATCAGCAAATGTGAACCAAAGATCCATGGACGGGCAAAGGGACACTGAGATTGCTATAGGATGTTATCAATGTGGAGATGGAACTGATAACCAAATGAAGCGTGGCTATATTCATGCATACAGAATGTCATTGTGGTATGAACACACTTGTCTTGCTGACGAATCGTTCTTAGAGCCAGAAAGTTTGGAATGTGTAAAGAGGGTGAGTTGTATTGGAGATCAGATGTGGGAAATTTATAGCAGTGAAGAGATTGTGGACATGGGAGGGGTGCACCTTGTGAGTTACCCTGTCAAGGTAACACAACAAGGGTCTGTGGAGGACTTAATTGATGGTGGTGGTCATTTTCCTGATACAAAATCTCTTATAAAGGGAAAGAGATCAAAACTGCTACCTCCTGTCTGTACTACTTA 2270 0.4159 MGKPELLHGTIEATIFNATPYSSAFPFNCICVNGKPAYVTIKIDNKKVAKTSEEHDRVWNQTFQIQCAHPADSIITITLKTTCSVLGKFHIQAQRLLKEESLINGFFPLHMENGKPNPQLKLRFLLWFKPAELEPSWAKLLSSGEYQGLKEATFPQRSNCEVKLYHDAHHSSTFQPPFNICGAPRNVWEDVYKAIEGAKYLIYIAGWSFNPKMALVRDPQTEIPHARGVKLGDLLKKKAEEGVAVRVMLWDDETSLPLIKNKGVMKTHDEDSFAYFKHTKVICRKCPRLHNKFPTLFAHHQKTISVDTKVPNSVNDREIMSFVGGLDLCDGRYDTEQHSLFQTLNMESHCYDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDASLLVPATTLANLFPSSTVPFKRDWKVQVYRSIDHVSASQFFRKLTVERSIHDAYVEAIRRADKFIYIENQYFIGGCHLWEKDTHCGCRNLIPVEIALKVVSKIKAKERFAVYIVIPMWPEGVPESEPVQDILHWTRETMAMMYRFIGEAIQESGEPGHPRDYLNFFCLANREPEGKHEYLPPHSPQPHTQYWNAQKNRRFMVYVHSKIMIVDDIYILIGSANVNQRSMDGQRDTEIAIGCYQCGDGTDNQMKRGYIHAYRMSLWYEHTCLADESFLEPESLECVKRVSCIGDQMWEIYSSEEIVDMGGVHLVSYPVKVTQQGSVEDLIDGGGHFPDTKSLIKGKRSKLLPPVCTT 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02152 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 295 332 IPR001736 GO:0003824
Bva08g02152 756 SMART pld_4 601 628 IPR001736 GO:0003824
Bva08g02152 756 SMART pld_4 295 332 IPR001736 GO:0003824
Bva08g02152 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 601 628 IPR001736 GO:0003824
Bva08g02152 756 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 124 IPR035892 -
Bva08g02152 756 PIRSF PLD_plant 4 756 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva08g02152 756 Pfam Phospholipase D Active site motif 296 332 IPR001736 GO:0003824
Bva08g02152 756 Pfam Phospholipase D Active site motif 604 628 IPR001736 GO:0003824
Bva08g02152 756 Pfam C2 domain 37 109 IPR000008 -
Bva08g02152 756 Gene3D Endonuclease Chain A 173 416 - -
Bva08g02152 756 Gene3D Endonuclease Chain A 417 646 - -
Bva08g02152 756 Pfam Phospholipase D C terminal 673 745 IPR024632 -
Bva08g02152 756 SUPERFAMILY Phospholipase D/nuclease 146 431 - -
Bva08g02152 756 PANTHER PHOSPHOLIPASE D ALPHA 4 756 - -
Bva08g02152 756 SUPERFAMILY Phospholipase D/nuclease 418 685 - -
Bva08g02152 756 PANTHER PHOSPHOLIPASE D 4 756 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02152 Bva-Chr8 14177997 14181246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02152 29 756 Phospholipase D Gene Family (Wang group) AT1G55180 64.161 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02152 K01115 - gmx:100807431 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02152 08 14177997 14181246 Bva02g02302 02 22786230 22788902 BWGD
Bva08g02152 08 14177997 14181246 Bva08g02152 08 14177997 14181246 ECH