Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02143 ATGGGGCTGCTTCTGATTTTCCTTCTAATTAAACTACATTTAGTTGTCAGTACTTCAGAGCTTCATAAATATGCAGctATCAATGCCCACAATACCGGAAGCTATTCAAGTATTGCACTTCCACCATCCATGTCACCTTCTGGAGTTCCAGCAAGCATTGCGCTTCCACCTTCTAAATTATTCCATAAGGCCACTGCAAAGAAATGGATACATGGTTATGAAGATTCTCCTCCGAAATCACTTCATAAGCATCACCATTCTGGAAGAAAGTCCAGCAACCCAACTCCTGTGCCAACTTACTCGGTTCATTCACCAGCTTACAACCATCAAGGTCCTTCAATCTTACCATCAAAGCCACCTGTCTCTTCCCCAATGAGCCGGGATTTTTCTGCACCTGCACCTTCACCAGCAGTTCGATCAAACCACTGGAATGTGCCTTCTCCATCAGATGCAATTTCTTCTCTAAGTCCATGGTTGAAGAAAACGAAGGCTCCACCACCAGCAACTGTTTTGGTTCTGCCACCTCCACCACCTAATAAGGATTGCATGCCACGGACTTGCGCGGAGCCTCTTACATATACACCTCTTGGATCAGCTTGTGGTTGTGTGTTACCTCTTCAAGTCAAACTCCGCCTTAGTATTGGAATATACAAGTTTTTCCCTTTAGTATCAGAGCTAGCTAAGGAAATTGCAGCCGGTGTTGTGCTGGATCACAATCAAGTTCGCATAGTGGGAGCCGATGCAGATAGTCAGGAACTAGAGAAAACCACAGttctcataaatttaataCCCAAAGGAGTAAAGTTTAATGATACTACGGCATCTTTAATCTACAAGAAATTCTGGCATAAGGAGATTGTCACAGATGCTTCCCTTTTTGGTGCCTATGAAGTACTCTTGGTTGATTATCCAGGTCTTCCACCCTCTCCTCCTTCAGCACCCTACGATGTTTCTAATATAGATGATGGGCCATTTCCTGGCAGAGGCAACAATGGAACAATGATGAAACCTTTAGGAGTAGACGTgacaaagaggaaaaaagaagggagTGGAAGAAACATGACTATTATCATTTTGCTGTCATCATTTACTGCTTTTGTTCTATTCATTGGAGTTGCCTGCCTTTGTCTGTTGAAATTTGGCCCTTGTGCTAATAAACCTGAGAAAGTTCTGAATTCTTCCCCATCTACTAAACCATCAGGGGCTGCCAAGTCATTTACTTATGGGAGCATGGCAGGTTCTGGATCAATGTCCTTCAGTTCTGGAACAATAACATACACAGGATCTGCTAAGACTTTTACTTTGGATGACATGGAGAAAGCAACAAATAACTTTGATGCTTCAAGAATACTAGGAGAAGGTGGGTTTGGGATTGTTTACAAAGGTGTTTTATACGATGGGAGGGAAGTGGCTGTGAAGATTCTCAAAAGAGAAGGTCAGCATGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTGTACCATagaaatttagttaaattgatAGGCATATGCATTGAGAAACAGACTCGCTGCCTAGTCTATGAGCTTATACCTAATGGAAGTGTGGGATCCCACTTACATGGTGCTGACAAGGAAACTAATCCCCTTGACTGGAATGCCCGCATGAAGATTGCACTTGGTGCAGCTCGAGGGCTGGCTTATCTGCATGAAGATTCAAGTCCATGTGTCATACATAGAGACTTCAAGTCCAGCAATATCTTGTTAGAATATGATTTTACACCAAAGGTTTCAGATTTTGGGTTGGCTAGAACAGCAATGGACCAGGGAACCAAGCATATCTCTACACATGTTATGGGAACATTTGGCTACCTAGCTCCCGAGTATGCAATGACCGGTCATCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTAGAGCTCTTAACTGGAAGAAAGCCAGTGGATTTGTCACAACCACCAGGTCAAGAAAACCTTGTTGCTTGGGTTCGTCCCCTTCTCACGAGCAAGGAGGGTTTAGAGACCATCATAGACCCAGTTATAGGGCCCGATATTTCCCTTGATACTGTGGTAAAAGTTGCAGCAATTGCATCAATGTGTGTACAGCCAGAAGTCTCCCAACGTCCTTTCATGGGCGAAGTAGTTCAGGCCTTGAAGCTGGTATGCAGTGAATTTGAGGAAACAAACAATGTCAATCCAAAACCAACAGGTTTCCATGAAGAGGGCGTCTTAATTGATATAGATAGGATTTCAGGTGAAATAATGGAACCTCCAGAGTTAAAGAATCCCTTTTCAGATCATGATACCAAAATAGCATTATCAGCATCAGAGTTTCTTAGTACATCACGCCAGGAATTTGGGTCATTCCGTCGGCATTCTGCTTCAGGGCCTCTAACTACTGAGAATAAAAAGCAGTTCTGGCAGAAGTTGAGAACCTCATCTAGAGGGAGTGTTAGCGAGCATAGATTTTCATCTAAACTATGTCCTGGATCCCATTA 2498 0.4251 MGLLLIFLLIKLHLVVSTSELHKYAAINAHNTGSYSSIALPPSMSPSGVPASIALPPSKLFHKATAKKWIHGYEDSPPKSLHKHHHSGRKSSNPTPVPTYSVHSPAYNHQGPSILPSKPPVSSPMSRDFSAPAPSPAVRSNHWNVPSPSDAISSLSPWLKKTKAPPPATVLVLPPPPPNKDCMPRTCAEPLTYTPLGSACGCVLPLQVKLRLSIGIYKFFPLVSELAKEIAAGVVLDHNQVRIVGADADSQELEKTTVLINLIPKGVKFNDTTASLIYKKFWHKEIVTDASLFGAYEVLLVDYPGLPPSPPSAPYDVSNIDDGPFPGRGNNGTMMKPLGVDVTKRKKEGSGRNMTIIILLSSFTAFVLFIGVACLCLLKFGPCANKPEKVLNSSPSTKPSGAAKSFTYGSMAGSGSMSFSSGTITYTGSAKTFTLDDMEKATNNFDASRILGEGGFGIVYKGVLYDGREVAVKILKREGQHGGREFLAEVEMLSRLYHRNLVKLIGICIEKQTRCLVYELIPNGSVGSHLHGADKETNPLDWNARMKIALGAARGLAYLHEDSSPCVIHRDFKSSNILLEYDFTPKVSDFGLARTAMDQGTKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWVRPLLTSKEGLETIIDPVIGPDISLDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETNNVNPKPTGFHEEGVLIDIDRISGEIMEPPELKNPFSDHDTKIALSASEFLSTSRQEFGSFRRHSASGPLTTENKKQFWQKLRTSSRGSVSEHRFSSKLCPGSH 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02143 832 ProSiteProfiles Protein kinase domain profile. 445 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02143 832 MobiDBLite consensus disorder prediction 811 832 - -
Bva08g02143 832 MobiDBLite consensus disorder prediction 72 145 - -
Bva08g02143 832 Gene3D Phosphorylase Kinase; domain 1 418 520 - -
Bva08g02143 832 SUPERFAMILY Protein kinase-like (PK-like) 424 718 IPR011009 -
Bva08g02143 832 PANTHER OS01G0750732 PROTEIN 43 831 - -
Bva08g02143 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Bva08g02143 832 Pfam Protein tyrosine and serine/threonine kinase 448 718 IPR001245 GO:0004672|GO:0006468
Bva08g02143 832 PANTHER OS01G0750732 PROTEIN 43 831 - -
Bva08g02143 832 MobiDBLite consensus disorder prediction 811 826 - -
Bva08g02143 832 Gene3D Transferase(Phosphotransferase) domain 1 521 736 - -
Bva08g02143 832 MobiDBLite consensus disorder prediction 91 111 - -
Bva08g02143 832 CDD STKc_IRAK 451 719 - -
Bva08g02143 832 ProSitePatterns Protein kinases ATP-binding region signature. 451 473 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02143 Bva-Chr8 14117864 14122631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02143 179 821 Receptor kinase-like Gene Family AT5G56890 59.451 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva08g02143 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02143 - - gmx:100814040 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02143 08 14117864 14122631 Bva02g02289 02 22697276 22701538 BWGD