Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02129 ATGGAAGGACGAGCAACGCAGTACAATCCTCGGACAGTGGAAGAGGTTTTTAGGGATTTCAAAGGCCGAAGAGCTGGACTTATCAAAGCCCTTACTACCGATGTTGGAGACTTATACAACCAATGTGATCCTGAAAAGGAGAATTTGTGCCTGTATGGATTGCCTAGTGAGCAGTGGGAAGTAAATTTGCCTGCTGAAGAAGTTCCTCCTGAGCTTCCTGAGCCTGTGCTGGGTATTAACTTTGCCAGGGATGGCATGGAAGAAAAGGACTGGTTATCATTGGTTGCTGTCCACAGTGATGCATGGTTACTTGCTATTGCCTTCTATTTTGGGGCCAGATTTGGATTTGATAAAGCTGACAGGAAACGACTTTTCAATATGATCAATGAACTCCCTACAGTATTTGAAATTGTTACTGGTGCAGCAAAGAAACAAGTTAAGGAGAAGTCTTCAGTTTCAAATCACAGCAGCAGCAAATCTAAGTCCAACTCTAAAGCCCGGGCTTCAGAACCTCAGGGAAGACAGACAAAGGCAATGCAACCAAAAGATGAGGATGATGAACTGGTTGagcaagatgaagatgaacaTGGAGATACCTTGTGCGGGGCGTGCGGTGAGAATTATGGTAATGATGAATTCTGGATCTGTTGTGATGTCTGCGAAAAGTGGTTCCATGGCAAGTGTGTGAAGATCACCCCTGCTAGGGCTGAGCATATCAAGCAATACAAGTGCCCATCATGCACTAACAAGAGAGCTCGCCCCTG 764 0.4437 MEGRATQYNPRTVEEVFRDFKGRRAGLIKALTTDVGDLYNQCDPEKENLCLYGLPSEQWEVNLPAEEVPPELPEPVLGINFARDGMEEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINELPTVFEIVTGAAKKQVKEKSSVSNHSSSKSKSNSKARASEPQGRQTKAMQPKDEDDELVEQDEDEHGDTLCGACGENYGNDEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCTNKRARP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02129 254 MobiDBLite consensus disorder prediction 151 176 - -
Bva08g02129 254 Pfam PHD-finger 201 250 IPR019787 -
Bva08g02129 254 Pfam Alfin 12 139 IPR021998 GO:0006355|GO:0042393
Bva08g02129 254 CDD PHD_AL_plant 200 250 IPR044104 -
Bva08g02129 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 249 IPR013083 -
Bva08g02129 254 SMART PHD_3 200 248 IPR001965 -
Bva08g02129 254 SUPERFAMILY FYVE/PHD zinc finger 190 251 IPR011011 -
Bva08g02129 254 MobiDBLite consensus disorder prediction 146 192 - -
Bva08g02129 254 ProSiteProfiles Zinc finger PHD-type profile. 198 250 IPR019787 -
Bva08g02129 254 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 7 254 - -
Bva08g02129 254 ProSitePatterns Zinc finger PHD-type signature. 201 247 IPR019786 -
Bva08g02129 254 PANTHER CPG BINDING PROTEIN 7 254 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02129 Bva-Chr8 14041299 14044954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02129 1 253 Alfin-like Transcription Factor Family AT3G42790 74.704 7.79e-129 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bva08g02129 Alfin 7.4e-68 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02129 - - gmx:100794662 451.44