Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02128 ATGGCACTTGTTATCGCTCTCTTCCGCCATGCTAGTGAAATATATCTCCACGTTCCTCTGACGTTGGTGGGACACTGGAATTTTGTCCggaaaaattctaatattccTCGACCGATGATGAGGATGATGGCCTTTTCGGTGAGCTTGAATGCAGCCGAGGAAGAATCGGCTCAAGAGGTTGATGTCCCGGCTGATATTGATTGGGAAATGCTTGATAAATCCAAGTTTTTCATCATCGGTACTGCCCTCTTCTCTTGTGTTTCAGCTACTCTCTATCCGGTTGTTGTGTTGAAAACCAGGCAGCAAGTAGCTCAATCCCACGTATCTTGCATCAAAACTGCATTTTCACTCATTAGGCATGAGGGTTTTCGAGCATTGTACAGAGGATTCGGGACTTCCTTAGCCGGAACAATCCCGGCTCGAGCTCTATATATGGCAGCCTTGGAGGTTACCAAGAGTAATGTAGGGACTGCTACGGTTAAGCTTGGGCTTGCAGAACCAACTGCGGCTGCAATTGCCAACGCGCTTGGAGGCTTGAGTGCAGCTATGGCAGCTCAACTTGTATGGACCCCAGTTGATGTTGTGAGCCAGAGATTGATGGTTCAAGGTGGTTATAATCCAAAAAATCCTAATGCTTCTAGAAGTCAATATGTTAACGGGATAGATGCCATCAGGAAAATTCTTAAAGCAGATGGTCCCAGAGGCTTGTATAGGGGATTTGGGATATCAACTTTGACTTATGCACCATCAAATGCTGTTTGGTGGGCTTCTTACTCTGTTGCTCAAAGGCTTTGTTGGGGTGGAATTGGGTATTACTTATGCAGGAAAGATGAAGAGAACAATAATACTTCAGTCAATGCATTGAGACCGGATTCGAAAACAGTAATGGCAGTTCAGGGAGTCAGCGCAGCGATGGCTGGTGGCATGTCTGCTTTAATTACCATGCCACTAGATACAATCAAGACAAGGCTGCAGGTCTTGGATGGCGATGAGAATGGCCGTAGAGGATCAACTGTTATGCAGACAGTGAGAAATTTGGTCAGGGAAGGTGGTTGGACAGCTTGTTATAGAGGGTTGGGACCCCGATGGGCTTCAATGTCATTCTCTGCAACAACAATGATCACTACTTATGAGTTTCTAAAACGGCTTTCCACGAAGAGTCAAGAGCTAGCATGGCTGGTTGAGCAATATTTGTG 1196 0.454 MALVIALFRHASEIYLHVPLTLVGHWNFVRKNSNIPRPMMRMMAFSVSLNAAEEESAQEVDVPADIDWEMLDKSKFFIIGTALFSCVSATLYPVVVLKTRQQVAQSHVSCIKTAFSLIRHEGFRALYRGFGTSLAGTIPARALYMAALEVTKSNVGTATVKLGLAEPTAAAIANALGGLSAAMAAQLVWTPVDVVSQRLMVQGGYNPKNPNASRSQYVNGIDAIRKILKADGPRGLYRGFGISTLTYAPSNAVWWASYSVAQRLCWGGIGYYLCRKDEENNNTSVNALRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGSTVMQTVRNLVREGGWTACYRGLGPRWASMSFSATTMITTYEFLKRLSTKSQELAWLVEQYL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02128 398 Pfam Mitochondrial carrier protein 83 154 IPR018108 -
Bva08g02128 398 Pfam Mitochondrial carrier protein 297 387 IPR018108 -
Bva08g02128 398 Pfam Mitochondrial carrier protein 171 265 IPR018108 -
Bva08g02128 398 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 48 389 - -
Bva08g02128 398 PRINTS Mitochondrial carrier protein signature 178 200 IPR002067 GO:0055085
Bva08g02128 398 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Bva08g02128 398 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 48 389 - -
Bva08g02128 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 264 IPR018108 -
Bva08g02128 398 SUPERFAMILY Mitochondrial carrier 69 380 IPR023395 -
Bva08g02128 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 294 383 IPR018108 -
Bva08g02128 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 154 IPR018108 -
Bva08g02128 398 Gene3D Mitochondrial carrier domain 75 392 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02128 Bva-Chr8 14038397 14040196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02128 47 389 Chloroplast and Mitochondria Gene Families AT1G72820 76.301 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02128 K15121 - zju:107403560 548.895