Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02105 ATGGGTGGTTCAGGGAGGTGGTTAAAATCActaatttctcttaaaaagcCCCATATAAATGATCAAGAGAAGGTTGATGATAAGAGTAAGAAGAAGTGGAGGTTATGGAGGAGCTCTTCAGAGGGATTTGGATCGTCAATGAAAAGCATGAAGAAGGGGCACGGTGCAGTATCTGAGAGGTCAGATTCCTCGTTTGCGGTGGATGATGTACATACTGCTGCCATGGCTACTCTTGTTCGAGTTCCACCTAAAGATTTCGTGGTGATCAAGCAGGAATGGGCTGCAATCCGGATTCAGGCTGTGTTCCGAGCCTTCTTGGCTCGACGAGCTTTGAGGGCCTTGAGAGCAGTGGTGAGGATCCAAGCTATATTTCGTGGACGACAGGTTAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTCAGAGTTCAGTCACGAGTCAGGGCTAGGAATGTGAGGAACTCACCAGAAGGGAAAGCTGTGCAGAAATTATTAGATGAGCGGCGCCTTCAAATTGATCCTGTTGAGCTAGCTGAGGAAGGATGGTGTGACATTCCAGGAACCATAGATGAAGTTAAGGCAAAGCTACAGACGAGGCAAGAAGCAGCCATCAAGAGGGACAGAGCAATGGCATACTCGTTTACTCAGCAGCAATCAAGACGCTGTGCTAGCCCAAAATCAAGAGCCACTAGGCCAATGAGTCCAATCAAACATCGTGGCCCAGACAACAAGAGCTTGGGATCCAGCTTGTTAGATCGCTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGATGGAAGATATGTATCTTGAACCACCAGACATGACTCCAATGTCCAGGAAAAGTGACAACATTGTTCTTCCCTTTCCTTCTTCGTATCAAGAACATGGCCTGGTTAAAGCAAGAAAGAATGGCGTGACAAGAAGGATTTCAGCTGCTAAATCTCTTACAACCAGTCAATCAACTGCATCATCTTCTGCCATAAGTTCTGAATGCGTATATGATGATAGCCCTGGATCAACTTCATACACATCTGCATCACCATCTTTGCCGTCTAGCAGCTTGCTTGCGGTTGAAGCAACAGAGGAAAGGAGTTTTTGCGCACCAAGCTACATGAATCTGACAGAGTCAACTAAGGCTAAGCAGAGAGCTTCCAGGTGTTCTTCTCAGAATGCAAAGAAGTTATTAATGGAGGATTGTATGTCTCATAGTGGAACAGCCACGTATCTGTATGGGGACACTAGCAGCGGTTCTGGTCCTGGTTCTGGTTCTGGTTCTGATTCCTCAGTCAATTTATGGAAAGATCACTACGCACCACCTCAACGGGCAAGTTTCCAAAAACGACACCATGGAAGATA 1367 0.4616 MGGSGRWLKSLISLKKPHINDQEKVDDKSKKKWRLWRSSSEGFGSSMKSMKKGHGAVSERSDSSFAVDDVHTAAMATLVRVPPKDFVVIKQEWAAIRIQAVFRAFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQSRVRARNVRNSPEGKAVQKLLDERRLQIDPVELAEEGWCDIPGTIDEVKAKLQTRQEAAIKRDRAMAYSFTQQQSRRCASPKSRATRPMSPIKHRGPDNKSLGSSLLDRWMAAKPWENRLMEDMYLEPPDMTPMSRKSDNIVLPFPSSYQEHGLVKARKNGVTRRISAAKSLTTSQSTASSSAISSECVYDDSPGSTSYTSASPSLPSSSLLAVEATEERSFCAPSYMNLTESTKAKQRASRCSSQNAKKLLMEDCMSHSGTATYLYGDTSSGSGPGSGSGSDSSVNLWKDHYAPPQRASFQKRHHGR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02105 455 Gene3D - 89 139 - -
Bva08g02105 455 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Bva08g02105 455 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Bva08g02105 455 MobiDBLite consensus disorder prediction 217 250 - -
Bva08g02105 455 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Bva08g02105 455 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 452 - -
Bva08g02105 455 SMART iq_5 113 134 IPR000048 GO:0005515
Bva08g02105 455 SMART iq_5 90 112 IPR000048 GO:0005515
Bva08g02105 455 MobiDBLite consensus disorder prediction 414 455 - -
Bva08g02105 455 MobiDBLite consensus disorder prediction 414 434 - -
Bva08g02105 455 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Bva08g02105 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 133 IPR027417 -
Bva08g02105 455 PANTHER IQ-DOMAIN 5-RELATED 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02105 Bva-Chr8 13919178 13921886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02105 1 444 IQD Protein Family AT1G72670 47.884 6.24e-106 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02105 - - ahf:112710157 446.047