Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02097 ATGGATGCAGCGGTTGGAATTGAGGATAATGATGAGGGAAAGGTTGAAGACTGTGGGATTGAAAAAAGTAGCTCTGTTTTGTCTTCTCCCAAGCAGATTGCTAATCCAGTTGTTTACAAGCTCGTTCGGGTTGAAGGAGATGGGAGGTTAGTACCTGCAACGGATGATGAAGTAATAAGAGTGGAGGATTTTCTTGAGGATGAGAATAGTGAGATGCATGTTGTCGCAGACACGGGGCAAAGTGTAGGATGCATATCAATTGAAAGATCTTCTTCTGGAAGGCTTCGAGTGGAGTGCTCCAAAGGTGTATCACAATCGGACACTGCTGAGTCAGATCTGGGGAAATTAAATGCACGCCTTCAGTACATTGACCAGATGTTGCAAGAGGtcaaacaagaagaaaagcttCGTTTGGCTTGTGGATCACCTGgtcatttttatgtaaatacgGACATCCAGTGTTCTGCTGATAAATTTCCTGTCGCGGATGGGATGATTCAGTCTGATATTTCCAGGCAGGAAGTTGTTCCTTCTTTAGCACCAAGTGTGAATGATAGTCATAGTAATCAATCTGTGAGTATTGGCCAATGTTCCAGACCTTCAGAAGGACTAGTAGAAAGTGGATCATCAACTTCTGCTGTCTATTCTACTTTCTGTCCTGATTTTTCTATGCTAAAAGAGGAAATATGCTTGGACAAGCTGTCAATTAGAGAACTCCACGAACTGTTTAAAGTGACTTTTGGACGGGAGACTACTGTTAAAGACAAGCAGTGGCTTAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGCGATGTATCAACAACAACTTTTATAGTTAGAGataataaattagtcaaaaagtGTGAGAAAGAAAGTTGTGGGAATGCTAATGCTGTACTCTCTGTGGATGCTACAGCTGGAGAAATGGATGTCAATTCAAAGGATCCATTGCCTGCTGAGGGTAGTGGTATTGATGATAATCAAGCTGTTTCTGGAAAGAGATTGAGAAATCATGATATGGAACCTGAATTGGGAAATAAGGATCTCCAGACAGGAGAAAAAGCTGCCAAAAGGGTTCGGAAGCCTACTAAGCGATATATTGAAGAGCTCTCAGAAAATGAACCCAGAGATCACAATCAGAGgtttttaagttcaaataaaaatacaggAATTGGACACTTTGCTCCAAACTCATACATGAGGCCTTCTAGGAACATGTTTTCAGAGGGGAGAACTGTTTTCACTAGGTTAGACTCTCTTGGAGGTTCTGGCATTCAAGTTCCTTGTGTTTCTCGGGTTCGGAGAAGCCGTCCAAGGAAAAATATCATGTCTCTTATGGTTCATCCATGTGGCACGGGCAATGCTATAAAATTGGTTGATAAGGCCCTTGGAGTTCATGGTTCTCAGGCTGATAGTGAGAGTCGGGATGAAACCTTGACCACACCTGCAGAATGTCAGCAGCCGTCTTTTACCGAATCTGGGCAAGATGAACAGTGTCCAATATTGCCCACAATTGAGCTACGGCAGGAATTTAGACTGAAAAAAGCAGATCCAACCACCCATATCTCAGATGACAAAATGGTTACTGTTCCGACTTCTAAAGGTGGAATGAGGAGGAAACACCATCGAGCATGGACTCTTGTTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGGTGGTCTGAGATCAAACGGCTTGCCTTTGCTTCCTACTCATATCGCACCTCTGTTGATCTTAAGGACAAGTGGAGGAACTTGCTCAAAGCTAGCTTTGCACAGGCGCCTGCAGATGAGGGGATAAACTCGCGGAAGCATGGTACAGTTCCTATTCCTGAGCAAATTTTGGTACGAGTAAGAGAGCTTGCTGAGTTGAATTCTCAGGTACCTCCAAATCTTAGCTCAAGCAAGCTAACAGAGGGAGCCAGGAGCATGCGTGAAGATAAATCAGCAGGGTACTTGTA 1979 0.4224 MDAAVGIEDNDEGKVEDCGIEKSSSVLSSPKQIANPVVYKLVRVEGDGRLVPATDDEVIRVEDFLEDENSEMHVVADTGQSVGCISIERSSSGRLRVECSKGVSQSDTAESDLGKLNARLQYIDQMLQEVKQEEKLRLACGSPGHFYVNTDIQCSADKFPVADGMIQSDISRQEVVPSLAPSVNDSHSNQSVSIGQCSRPSEGLVESGSSTSAVYSTFCPDFSMLKEEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSTTTFIVRDNKLVKKCEKESCGNANAVLSVDATAGEMDVNSKDPLPAEGSGIDDNQAVSGKRLRNHDMEPELGNKDLQTGEKAAKRVRKPTKRYIEELSENEPRDHNQRFLSSNKNTGIGHFAPNSYMRPSRNMFSEGRTVFTRLDSLGGSGIQVPCVSRVRRSRPRKNIMSLMVHPCGTGNAIKLVDKALGVHGSQADSESRDETLTTPAECQQPSFTESGQDEQCPILPTIELRQEFRLKKADPTTHISDDKMVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLAFASYSYRTSVDLKDKWRNLLKASFAQAPADEGINSRKHGTVPIPEQILVRVRELAELNSQVPPNLSSSKLTEGARSMREDKSAGYL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02097 659 Pfam Myb-like DNA-binding domain 545 593 IPR001005 -
Bva08g02097 659 ProSiteProfiles Myb-like domain profile. 546 593 IPR001005 -
Bva08g02097 659 MobiDBLite consensus disorder prediction 634 659 - -
Bva08g02097 659 MobiDBLite consensus disorder prediction 336 391 - -
Bva08g02097 659 CDD SANT_TRF 544 594 - -
Bva08g02097 659 MobiDBLite consensus disorder prediction 475 497 - -
Bva08g02097 659 MobiDBLite consensus disorder prediction 311 330 - -
Bva08g02097 659 SUPERFAMILY Homeodomain-like 544 603 IPR009057 -
Bva08g02097 659 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 658 - -
Bva08g02097 659 PANTHER TRF-LIKE 3 1 658 - -
Bva08g02097 659 MobiDBLite consensus disorder prediction 336 382 - -
Bva08g02097 659 Gene3D - 533 639 - -
Bva08g02097 659 SMART sant 542 595 IPR001005 -
Bva08g02097 659 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 538 597 IPR017930 -
Bva08g02097 659 MobiDBLite consensus disorder prediction 468 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02097 Bva-Chr8 13877293 13883858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02097 546 604 Single Myb Histone (SMH) Gene Family AT1G17520 43.548 8.88e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g02097 Myb_DNA-binding 7.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02097 - - gmx:100782501 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02097 08 13877293 13883858 Bva08g02097 08 13877293 13883858 ECH