Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02091 atgggtCGGAGTCCTTGTTGTTCTAAAGAAGGTTTGAATAGAGGAGCATGGACAGCTATAGAAGACAAAATTCTCACTCAATACATTATGATCCACGGTGAAGGAAAATGGAGACAGCTACCTAAAGAAGCAGGTCTTAAGAGATGTGGGAAGAGTTGCAGGCTGAGATGGTTAAATTATCTGAGACCTGACATTAAAAGAGGAAATATTACCCATGACGAAGAGGAACTCATTATCAGGCTCCACAAACTACTTGGAAACAGgtGGTCTTTGATAGCTGGACGGCTTCCGGGCCGAACAGACAATGAAATCAAGAACTACTGGAGCACCAATATTGGAAAGAAAGCTCAAAATGGTAATCCAAACTCTTCCACTTCACCTAATTCATCTCAAACAAACCCGAAAACCCAACAGCAGACTCCGAACCCACCCAATAAGGATTCATCCGTGATCCGGACCAAGGCAACTAGGTGCACCAAGGTAATACTCACACAAGAACCTCACCAACTTGGAACAGTGGTTGCACCCTCCATGACTTATGACAGTGGCACCGATGACAAGATGGTGGCCGGAGTGGGAGTAGGACCGGGATCGGGATTGGAGCTGCTAGCTTCGACTTCACCATTTGATTCAGAAGGGAACAACCCGTTGGATTTCTTGGTGGATTTTGAGATGGATCAGAGTTTCTTTTCGGATCTTCTTAAGGTGGACTTTTCAGAGCCATCTTGCTTTGAAAATACCGTGCAAGACAATAACGTCAGCATAAGAGACAAAAGTCAATTATCGCCAAAGTCCAATGACAATGTCACTGTCTTCCAACCAACGGCAACTTTAGGGGAGGCTGAATTTGATTGGCTTTA 860 0.4419 MGRSPCCSKEGLNRGAWTAIEDKILTQYIMIHGEGKWRQLPKEAGLKRCGKSCRLRWLNYLRPDIKRGNITHDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWSTNIGKKAQNGNPNSSTSPNSSQTNPKTQQQTPNPPNKDSSVIRTKATRCTKVILTQEPHQLGTVVAPSMTYDSGTDDKMVAGVGVGPGSGLELLASTSPFDSEGNNPLDFLVDFEMDQSFFSDLLKVDFSEPSCFENTVQDNNVSIRDKSQLSPKSNDNVTVFQPTATLGEAEFDWL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02091 286 CDD SANT 71 108 IPR001005 -
Bva08g02091 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva08g02091 286 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 265 - -
Bva08g02091 286 Gene3D - 7 67 - -
Bva08g02091 286 CDD SANT 16 61 IPR001005 -
Bva08g02091 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva08g02091 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva08g02091 286 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bva08g02091 286 MobiDBLite consensus disorder prediction 112 151 - -
Bva08g02091 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva08g02091 286 Gene3D - 70 143 - -
Bva08g02091 286 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva08g02091 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva08g02091 286 PANTHER TRANSCRIPTION FACTOR TT2 1 265 - -
Bva08g02091 286 SMART sant 13 63 IPR001005 -
Bva08g02091 286 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02091 Bva-Chr8 13851000 13853172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02091 1 151 MYB Transcription Factor Family AT2G16720 60.265 6.18e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g02091 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02091 K09422 - jre:109001985 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01101 05 5676798 5678307 Bva08g02091 08 13851000 13853172 ECH
Bva08g02091 08 13851000 13853172 Bva08g02091 08 13851000 13853172 ECH