Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02089 ATGGCTTGTGTGAGTGATAAGGCTATTATGAGACAAGAGAAGCAAATTGAAGCCATGACAAACGCTACTCTTAGCAAGGGAGCTTGGACACCAGAGGAAGATAGCAAACTGGCTGAGGTTATTGCAGTTCATGGAGCCAAAAGGTGGAAATCCATTGCAGCTAAAGCAGGTCTTAATAGGTGTGGCAAGAGTTGCAGGCTAAGATGGTTGAATTATCTGAGACCCAGTATCAAGAGGGGCAACATATCAGACCAAGAAGAGGATTTGATACTTAGGCTTCATAAGCTCCTTGGAAACAGgtGGTCTCTGATTGCGGGAAGGTTACCAGGTCGAACAGATAATGAGATAAAGAACTACTGGAATTCTCATTTgagcaagaaaataaagcagagagagaaacaatgTGGGAGCTCAATGAGAGAAGAGAGCACATCACGGATGAAAAGGGTGGTAGAGGAGGCCCCAGCTGAGCTaattagagaagaaaattcaacTGAAGTAATTGAAGACTCATATCAGTTAAACTTCGATGCCAATGACTTCTTTGATTTCTCTCTAAAAGGTATGGAGTGGGTTAGCAGATTCCTTCAAGTAAATGATCATCAAGATCTAAGTGGCATCTCAAACTG 629 0.3943 MACVSDKAIMRQEKQIEAMTNATLSKGAWTPEEDSKLAEVIAVHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPSIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQREKQCGSSMREESTSRMKRVVEEAPAELIREENSTEVIEDSYQLNFDANDFFDFSLKGMEWVSRFLQVNDHQDLSGISN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02089 209 CDD SANT 28 73 IPR001005 -
Bva08g02089 209 Gene3D - 26 78 - -
Bva08g02089 209 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 13 200 - -
Bva08g02089 209 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Bva08g02089 209 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Bva08g02089 209 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Bva08g02089 209 SMART sant 78 126 IPR001005 -
Bva08g02089 209 SMART sant 25 75 IPR001005 -
Bva08g02089 209 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Bva08g02089 209 PANTHER TRANSCRIPTION FACTOR WER-LIKE ISOFORM X1 13 200 - -
Bva08g02089 209 SUPERFAMILY Homeodomain-like 25 120 IPR009057 -
Bva08g02089 209 CDD SANT 83 124 IPR001005 -
Bva08g02089 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Bva08g02089 209 Gene3D - 82 153 - -
Bva08g02089 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 77 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02089 Bva-Chr8 13847718 13848796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02089 1 128 MYB Transcription Factor Family AT3G13540 60.938 3.14e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g02089 Myb_DNA-binding 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02089 K09422 - jre:109001983 264.618