Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02087 ATGATAGGTGCAAATGTAAGAAACAGGTCTCCTTTCACAGCAACTCAGTGGCAAGAACTTGAGCAACAAGCTCTGATTTACAAGTACATGCTCTCAGGGGTGCCAATCCCACCTGATCTCATCTACTCTATAAAAAGAAGTCTAgactcttcaatttcttcaagaCTTTTCCCACACCATCCCATTGGATGGGGATGTTTTGAAATGGGCTTTGGCAGAAAAGTAGACCCAGAACCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCATCAACAAGCACTAACACAAACACAAGCGCAAACTCCTCGCAGACAGTTTCATCATCATATAACCAAAACCTATCCGTGAGCAACCCAAATACACCCTCAAGTACctcttctttccctttctctcaATTGCCATCATCTATGGCATCCGAATCCCAGCCCTATTCCCACCCTTACCAAAATTCTTCTCTCAATCCCTTCTTTTACTCCCATTCTTCATCCTCTTCTAGACCTCCTGATTCTGACTTTTCCACTCAAAATAGCAATACCCACCAGCTTTTTATGGACTCTAGATCTTATTCTCAGGATGAAAAGGATTATAGCAGGCATATTCATGGAATGAGGGAGGGTGTGGACGAGCGTGCTTTCTTCCCAGAAGTTTCAGGAACTGCAAGGAGCTTCCCGGATTCATATCAGCAATTATCAATAAGCTCCTATAAGTCCTATTCAAATTCTCAGTTCCAAAACGTCAATGACAATCCAAGGCAACAAGAGCCACATTGCTTTGTTTTGGGTACTGACTTCAAATCAGCAAGACCAAGTAAAGGTGAGAAAGAAGCTGAGACAAGCCAAAGACCACTTCACCACTTCTTTGGGGAGTGGCCACCAAAGAACTCAGATTCCTGGCTTGATCTTGCTTCCAACTCCAGAATCCCCTCAGAAGAGTG 1031 0.4219 MIGANVRNRSPFTATQWQELEQQALIYKYMLSGVPIPPDLIYSIKRSLDSSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSSTSTNTNTSANSSQTVSSSYNQNLSVSNPNTPSSTSSFPFSQLPSSMASESQPYSHPYQNSSLNPFFYSHSSSSSRPPDSDFSTQNSNTHQLFMDSRSYSQDEKDYRHIHGMREGVDERAFFPEVSGTARSFPDSYQQLSISSYKSYSNSQFQNVNDNPRQQEPHCFVLGTDFKSARPSKGEKEAETSQRPLHHFFGEWPPKNSDSWLDLASNSRIPSEE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02087 342 MobiDBLite consensus disorder prediction 103 213 - -
Bva08g02087 342 MobiDBLite consensus disorder prediction 328 342 - -
Bva08g02087 342 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva08g02087 342 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 340 - -
Bva08g02087 342 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva08g02087 342 MobiDBLite consensus disorder prediction 295 342 - -
Bva08g02087 342 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva08g02087 342 PANTHER - 1 340 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva08g02087 342 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Bva08g02087 342 Pfam WRC 77 119 IPR014977 -
Bva08g02087 342 MobiDBLite consensus disorder prediction 298 313 - -
Bva08g02087 342 MobiDBLite consensus disorder prediction 117 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02087 Bva-Chr8 13830439 13832427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02087 9 320 GRF Transcription Factor Family AT3G13960 42.623 2.90e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva08g02087 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02087 - - vun:114166369 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02087 08 13830439 13832427 Bva08g02087 08 13830439 13832427 ECH