Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02083 atggaaccaaacccaacttCAGATCACCATATGAACTGGCTTGAAGAATCGGTTTCATTCATTTCATCATTCTTGGATGATCCATACAGCTCTGGTGATATTGAACAATACCAGCTATGGGATCAAGGCCAAGACATAGGCCATTATCAAATCATTGGTTCCCCCAATGCTGCTGCCATTTCCACCAAGATTGCtgctattaataataataccaCAACACCCACAGATCAGCCTTATAGTTCTATAAATTCACCCCCTTGTGAATTGCCCAGTAAGCGAAAAAATTGTGAAGATTCAAGTCTCAAACCAGCTTCAAATCATAAGCACAAGAAAAGTCAGACCCGTGCAGTGATTGAAGCTCAGAATGGGGATGCAGTTGTTGAAGGGACAACGGTTAAAAAATCTGGAGGAAACAAGAAAGGTGGTGCTAAAGGCAATGGAAATAACTGCAATAACGGTAGTAACAAGGAAGGGAGGTGGGCAGAGCAGTTGCTTAACCCTTGTGCTGCTGCCATAACTGCAGGGCAGCTCAACCGAGTGCATCACCTCTTATATGTTCTCCATGAGCTTGCCTCCGCCACCGGCGACGCCAACCACCGTCTTGCAGCTCATGGTCTCCGAGCGCTGAAACAGCATTTATCATCTTCCACCACTTGCTCTTCTCCTGCTGCCTCTGCAGGGAATTTTACCTTTGCTTCTACAGAACCCCGGTTCTTTCAACGATCTCTGCTCAAGTTCTATGAGGTAAGCCCCTGGTTTTCCTTTCCCAATAACATAGCAAATGCTTGTATCCTCCAAATTCTAGCTGAAAGAGAAAACAGTTCACACGCTCTTCATATCGTTGACATTGGGGTCTCTTATGGTGTGCAATGGCCAACATTTCTAGAGGCCTTGACTCGCCGGCCGGGTGGACCTCCTCCACTGGTTCGCCTCACGGTGGTAACTGCCTCCACTGACAAGGACTCCCCATTTTCAATTGGTCCGCCAGGTGACAATTTCTCTTCTAGGCTCCTTGGTTTTGCCAAGTCCATCAATGTCAATTTGCTGATAAAAAGGCTCGATAATCAACCTTTAATGAACCTCAATGCCCAAGTTATAGATTCCTCCTCCACCGAAACTTTAATAATATGTGCACAATTTAGGCTCCACCACCTGAATCATAATAGCCCCGATGAGAGAAGTGAATTTCTGAGAATGTTGAGGAGCATGGATCCTAAAGGGGTTATATTAAGTGAAAACAATATGGAATGTAGCTGCAACCATTGTGGGAATTTCACTACGGGATTTTCACGGAGAGTAGAGTACCTATGGAGGTTTTTGGATTCTACAAGCTCGGCGTTCAAGGGTCGGGAGAGCGAGGAAAGGAGACTGATGGAAGGGGAGGCAGCAAAGGCCTTGACAAACCAAGGTGAGATGAATGAAGTGAGAGAGAAATGGTGTGAAAGGATGAAGGAAGCAGGGTTTATGGGGGAGATATTTGGAGAGGACGCCACTGATGGAGGTAGAGCCTTGTTGAGGAAGTATGACAATAATTGGGAGATGAGAGTAGAAGAGAACAATACCAGTGTGGGACTATGGTGGAAGGGGCAGCCTATCTCTTTCTGTTCCTTGTGGAAAATGGATGGTAAAGACAAGAGAGGATCAAGCTCAACACTCACTGCTTGCCTTTA 1670 0.4497 MEPNPTSDHHMNWLEESVSFISSFLDDPYSSGDIEQYQLWDQGQDIGHYQIIGSPNAAAISTKIAAINNNTTTPTDQPYSSINSPPCELPSKRKNCEDSSLKPASNHKHKKSQTRAVIEAQNGDAVVEGTTVKKSGGNKKGGAKGNGNNCNNGSNKEGRWAEQLLNPCAAAITAGQLNRVHHLLYVLHELASATGDANHRLAAHGLRALKQHLSSSTTCSSPAASAGNFTFASTEPRFFQRSLLKFYEVSPWFSFPNNIANACILQILAERENSSHALHIVDIGVSYGVQWPTFLEALTRRPGGPPPLVRLTVVTASTDKDSPFSIGPPGDNFSSRLLGFAKSINVNLLIKRLDNQPLMNLNAQVIDSSSTETLIICAQFRLHHLNHNSPDERSEFLRMLRSMDPKGVILSENNMECSCNHCGNFTTGFSRRVEYLWRFLDSTSSAFKGRESEERRLMEGEAAKALTNQGEMNEVREKWCERMKEAGFMGEIFGEDATDGGRALLRKYDNNWEMRVEENNTSVGLWWKGQPISFCSLWKMDGKDKRGSSSTLTACL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02083 556 MobiDBLite consensus disorder prediction 91 105 - -
Bva08g02083 556 Pfam GRAS domain family 162 539 IPR005202 -
Bva08g02083 556 ProSiteProfiles GRAS family profile. 152 539 IPR005202 -
Bva08g02083 556 MobiDBLite consensus disorder prediction 71 154 - -
Bva08g02083 556 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 2 540 IPR030015 -
Bva08g02083 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 540 IPR005202 -
Bva08g02083 556 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02083 Bva-Chr8 13814002 13815672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02083 3 539 GRAS Transcription Factor Family AT3G13840 51.013 1.25e-175 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva08g02083 GRAS 5.2e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02083 - - gmx:100810818 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02083 08 13814002 13815672 Bva08g02083 08 13814002 13815672 ECH