Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02077 ATGCCTCTCAAAAGGCTTTTCCTGAAAGCCTTTGTAATTGGATGTTTCAAGGCCAAGCACCAATCCCAGAACCCAACCGTAGTTCCCAGAAAAACATGTTCCAGGAGGTTGTCCCTTTCTGATGTGAGCAATTCTTCATCATTCTCTGTCGTGAGTGATTTATCCAATTCTCTTCTTGGATCAAATGTTCATATTTTCTCTTACAAGGAACTCAAAGATATCACAAACAACTTCTGCAGAAGCAGTATTCTTGGGCAAGGTGGGTTTGGACAAGTATACAAAGGATTCATTGATGACAAGCTTAGGCCTGGACTCGAAGTTCAAGTTGTAGCAGTTAAGAAGTTAGATTTGGATGGCAATCAAGGCCACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAGTTGAAGCACCCTCATTTGGTGAACTTGATTGGCTATTGCTGTGAAGATGAGAATAGGCTCCTTGTCTATGAATACATGGAACGGGGCAACCTTGAACACAAGCTTTTCAAAGGTTATTTGGCAACCTTGCCTTGGCTAACGAGACTTAAAATAGCAATTGGAGCTGCAAAAGGGCTTGCTTTTCTTCATGAAGAAGAGAAGCCAGTCATATATAGAGACATTAAAACCTCAAACATTCTATTAGATGCAGATTACAATTCCAAACTCTCCGATTTCGGGCTAGCAACAGATGGTCCAGAAGGAGATGAAACACATATCACAACTCAGGTAATGGGCACCCACGGTTATGCTGCTCCTGAGTATATCATGACAGgACATTTGACAACTATGAGTGATGTATATAGCTTTGGGGTGGTTCTTTTGGAGCTACTTACTGGAAAGAGGTCTGTGGACAAGAAAAGAGCCACCAGAGAACAAGATTTGGTAGAGTGGGCAAGACCCTTATTGAAGGATCCTCATAAACTTGAAAGAATAATGGACCCAAGACTTGAGGGTCAGTACTCCTCACAAGGGGCTAGAAAGGTTGCAGCTTTAGCTTATCAGTGCCTTAGCAATCAGGCAAAGTCCAGACCCACAATGCGCACAGTGGTTAAGACCTTAGAGCCTCTCATGGACATAGCAGATTTCCCAGTTGGCCATTTTGTTTATGTAGTTCCCAGTAAGGTAGGAAATGAAACTTCAGCTCAAAGCAATgggaaaaaaggagaaaatggcCATCATAAGCAAAGcaggaatgaaaagaaaagtcaacAAGACGAAGAAAGGGGTGAGAAGAAAGCCAAGGCCCGCAACCGGCTTCGAAAAAGTCATAGACATAGAGGTCAAATTAAGCCACTGAAGAATCGTGCAGTTTACTCAGATACTACCCTATATAAAACTCTGGGTACCAGTCTATACTCTCCCAAACAAGGGTCACAAAAAGAGTG 1391 0.4141 MPLKRLFLKAFVIGCFKAKHQSQNPTVVPRKTCSRRLSLSDVSNSSSFSVVSDLSNSLLGSNVHIFSYKELKDITNNFCRSSILGQGGFGQVYKGFIDDKLRPGLEVQVVAVKKLDLDGNQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDENRLLVYEYMERGNLEHKLFKGYLATLPWLTRLKIAIGAAKGLAFLHEEEKPVIYRDIKTSNILLDADYNSKLSDFGLATDGPEGDETHITTQVMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKRSVDKKRATREQDLVEWARPLLKDPHKLERIMDPRLEGQYSSQGARKVAALAYQCLSNQAKSRPTMRTVVKTLEPLMDIADFPVGHFVYVVPSKVGNETSAQSNGKKGENGHHKQSRNEKKSQQDEERGEKKAKARNRLRKSHRHRGQIKPLKNRAVYSDTTLYKTLGTSLYSPKQGSQKE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02077 463 MobiDBLite consensus disorder prediction 416 433 - -
Bva08g02077 463 PANTHER BNAA02G16030D PROTEIN 26 415 - -
Bva08g02077 463 ProSitePatterns Protein kinases ATP-binding region signature. 84 114 IPR017441 GO:0005524
Bva08g02077 463 MobiDBLite consensus disorder prediction 441 463 - -
Bva08g02077 463 MobiDBLite consensus disorder prediction 389 415 - -
Bva08g02077 463 SUPERFAMILY Protein kinase-like (PK-like) 54 356 IPR011009 -
Bva08g02077 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Bva08g02077 463 MobiDBLite consensus disorder prediction 379 463 - -
Bva08g02077 463 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02077 463 SMART serkin_6 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02077 463 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Bva08g02077 463 Pfam Protein tyrosine and serine/threonine kinase 82 355 IPR001245 GO:0004672|GO:0006468
Bva08g02077 463 CDD STKc_IRAK 84 358 - -
Bva08g02077 463 Gene3D Transferase(Phosphotransferase) domain 1 161 364 - -
Bva08g02077 463 PANTHER OS01G0588500 PROTEIN-RELATED 26 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02077 Bva-Chr8 13786419 13788436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02077 63 386 Glycoside Hydrolase AT3G07070 48.318 3.74e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva08g02077 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02077 - - gmx:100790454 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02077 08 13786419 13788436 Bva02g02216 02 22307079 22309424 ECH
Bva06g00519 06 5715699 5717929 Bva08g02077 08 13786419 13788436 ECH
Bva08g02077 08 13786419 13788436 Bva08g02077 08 13786419 13788436 ECH
Bva08g02077 08 13786419 13788436 Bva10g00494 10 4825033 4827380 ECH
Bva08g02077 08 13786419 13788436 Bva06g02289 06 14862191 14866187 ECH