Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02072 ATGTCTGCAACTGTGATAAGCGATCCTAATCCTGTGGTGATATCTGCGCCAGAAACTCAACCAGTGGCTAGTTTACTAGCTACTGCACAGAACGAAGTTGAATTTGCCATCTGTGACTGCTGTGGACTAACAGAAGAGTGCACCCCGGCATACATCGAGCGAGTTCAAGAGAGATACCATGGCAAATGGATTTGTGGATTATGTGCCGAAGCTGTTAAAGATGAAATCATAAGGTCTGAAAGGCTTGTGAGTACTGAAGAAGCAATGACAAAGCATATGAACTTCTGCAAAAAGTTTAAGACTTCAGGGCCACCTACAAACCCCACAGTACATTTGATATCAGCTATGAGACAGATTCTTAGGCGTAGCTTGGATTCTCCGAGAGGGATAAGGTCCACACCAAGTAGTCCAACTAAGATGGCTAACAGGGAAATTGGTAGCCCAGGGCTAACCAGGTCTGAGAGCTGCTTATCTACTCTGTCTGGTGCTTG 491 0.4542 MSATVISDPNPVVISAPETQPVASLLATAQNEVEFAICDCCGLTEECTPAYIERVQERYHGKWICGLCAEAVKDEIIRSERLVSTEEAMTKHMNFCKKFKTSGPPTNPTVHLISAMRQILRRSLDSPRGIRSTPSSPTKMANREIGSPGLTRSESCLSTLSGA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02072 163 MobiDBLite consensus disorder prediction 128 163 - -
Bva08g02072 163 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 19 160 - -
Bva08g02072 163 PANTHER OS01G0745000 PROTEIN 19 160 IPR012876 -
Bva08g02072 163 Pfam Protein of unknown function (DUF1677) 33 122 IPR012876 -
Bva08g02072 163 MobiDBLite consensus disorder prediction 124 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02072 Bva-Chr8 13752365 13753837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02072 - - lja:Lj3g3v2576730.1 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02072 08 13752365 13753837 Bva02g02210 02 22270745 22272220 ECH
Bva08g02072 08 13752365 13753837 Bva08g02072 08 13752365 13753837 ECH
Bva08g02072 08 13752365 13753837 Bva10g00491 10 4818575 4819380 ECH
Bva08g02072 08 13752365 13753837 Bva06g02292 06 14873475 14874659 ECH