Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02063 ATGTCTAATTTCCCTGGCGCGGTGGGGGCCGATGGCCGGAGGCCCGGAAAGTTGCCGGAGAGATCCAATTTTTCACAGACTTGCAACCTCTTGAGCCAGCTCCTGAAGGAGAAACGAACCTTTGGAGGTCTCAGCCTTGGAAGTGCCGGGAAAATGGAACCCAGAGGAACTTCAAAGAACTTGCAAACAACCTTAGGAAATTCGGATTCAGCTATGGAATTTCTTCCACAGTTTGTAGAAAACGCCTGCATTAAGCAGTCTGACAACAGGTTACCGGATCCCGCCGGAAGCTCCGAATTGACGATATTCTACGGCGGTAAAGTGTTAGTATTTGATACCTTTCCGGCGGAGAAGGCGACGGAAATCATGGAACTGGCCACCAAGTTGAGCTCCGATAGCTCTGGAACAAACCAGAAACCACCTAGTGCTTCTGTTGCTACCGAAAAAGTGAACGCCATGGAAATACCTCAAACAAACACCGACCAAGAAGTCCCTCGACCAGGAACCCAATCTATCGGTTCAGATATGAGATACCCAAGGAGAGCATCACTTTTGAAATTCCTTgagaagaggaaagaaagGGTCATGGCTAAAGGACCTTACCAATTGAATAACCCAACGAGAGATGGTACCAAGAATGAAGGAAACAGTTCAGGAGATGACCATGGAGATCAATCTTACAAACAGTTTGACCTTAATTTGTA 704 0.4616 MSNFPGAVGADGRRPGKLPERSNFSQTCNLLSQLLKEKRTFGGLSLGSAGKMEPRGTSKNLQTTLGNSDSAMEFLPQFVENACIKQSDNRLPDPAGSSELTIFYGGKVLVFDTFPAEKATEIMELATKLSSDSSGTNQKPPSASVATEKVNAMEIPQTNTDQEVPRPGTQSIGSDMRYPRRASLLKFLEKRKERVMAKGPYQLNNPTRDGTKNEGNSSGDDHGDQSYKQFDLNL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02063 234 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 224 IPR040390 -
Bva08g02063 234 Pfam tify domain 95 126 IPR010399 -
Bva08g02063 234 MobiDBLite consensus disorder prediction 154 169 - -
Bva08g02063 234 Pfam Jas motif 180 202 IPR018467 -
Bva08g02063 234 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 10 224 - -
Bva08g02063 234 MobiDBLite consensus disorder prediction 195 234 - -
Bva08g02063 234 MobiDBLite consensus disorder prediction 130 149 - -
Bva08g02063 234 SMART tify_2 93 128 IPR010399 -
Bva08g02063 234 MobiDBLite consensus disorder prediction 1 23 - -
Bva08g02063 234 ProSiteProfiles Tify domain profile. 93 128 IPR010399 -
Bva08g02063 234 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02063 Bva-Chr8 13699680 13701790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02063 2 208 Tify Gene Family AT1G19180 35.443 2.05e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva08g02063 tify 1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02063 K13464 - gmx:100778559 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02063 08 13699680 13701790 Bva08g02063 08 13699680 13701790 ECH