Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02052 ATGGCTAGTGGAGAAGAGAAAGGCAATGACTTCTATGCGGTTCTGGGATTGAACAAGGAATGCTCGGATTCAGAGCTCAGAAATGCCTATAAGAAACTTGCCATGAAATGGCATCCTGATCGTTGTTCAACGTCGGGGAACTCAAAGTCTGTGGAAGAAGCTAAGAAGAATTTTCAGGCAATCCAGCAAGCCTATTCTGTTTTATCTGATGCAAACAAAAGATTCTTGTACGACGTGGGAGTCTATGACAGCGATGACGACCAAAACGGCATGGGAGACTTCTTGAACGAAATGGCAACAATGATGAGCCAAACAAATCCTAATGAAAATGGGCAGGAGAGCTTTGAGGAGTTGCAACGGCTTTTTGAAGAAATGTTTCAAGGAGACATTGGATCATCGGAGAGTAACTCTAACGCTGCTGCTGGTTGTTCTACTTCATCCTCCTACGCGTCCTTTGGTGGAAATTCTAGTTCCAACAAACGCAATTCCTCGGAGATGAATACTGGCAAGGCAGAGGATTTCAATGCCAGCGACCAGAACTTCTGTCTGGGGGTCATTCTTGTTCCTTGTATAACTGGATACAAAACCACCAAGGAAGTGGAGCGACTTCCAGATATGAACAAGGGAAAGGGAGTTCGAAGAGGAATTCTAGGAGGAGGAGGTAGACACAGAAGGAAGCAGAAGATTTCATCTTCCTCCGGTGACTTTTCTGCCGAGCAATCAACTCATTGGCATGCTAACTACTGGCATTTCTGGGAAATAACTGGAATGCTGGTCGCCAGAATTGCGCCTTCTATGCAACTGAGAGTCAGGGAATGCTgcagttttagttttttgcCTTTCTACCATGCCTTGCAATGTGATGGTAGTTA 872 0.4438 MASGEEKGNDFYAVLGLNKECSDSELRNAYKKLAMKWHPDRCSTSGNSKSVEEAKKNFQAIQQAYSVLSDANKRFLYDVGVYDSDDDQNGMGDFLNEMATMMSQTNPNENGQESFEELQRLFEEMFQGDIGSSESNSNAAAGCSTSSSYASFGGNSSSNKRNSSEMNTGKAEDFNASDQNFCLGVILVPCITGYKTTKEVERLPDMNKGKGVRRGILGGGGRHRRKQKISSSSGDFSAEQSTHWHANYWHFWEITGMLVARIAPSMQLRVRECCSFSFLPFYHALQCDGS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02052 290 PANTHER PUTATIVE, EXPRESSED-RELATED 1 232 - -
Bva08g02052 290 MobiDBLite consensus disorder prediction 208 237 - -
Bva08g02052 290 CDD DnaJ 10 70 IPR001623 -
Bva08g02052 290 SUPERFAMILY Chaperone J-domain 9 93 IPR036869 -
Bva08g02052 290 PRINTS DnaJ domain signature 30 45 IPR001623 -
Bva08g02052 290 PRINTS DnaJ domain signature 12 30 IPR001623 -
Bva08g02052 290 PRINTS DnaJ domain signature 53 73 IPR001623 -
Bva08g02052 290 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Bva08g02052 290 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 232 - -
Bva08g02052 290 MobiDBLite consensus disorder prediction 149 171 - -
Bva08g02052 290 SMART dnaj_3 9 73 IPR001623 -
Bva08g02052 290 Pfam DnaJ domain 10 78 IPR001623 -
Bva08g02052 290 Gene3D DnaJ domain 7 139 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02052 Bva-Chr8 13647466 13651327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02052 12 78 C2H2 Transcription Factor Family AT1G74250 43.284 5.22e-10 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02052 08 13647466 13651327 Bva08g02052 08 13647466 13651327 ECH