Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02046 ATGAGATTGAGAACATCAGATCTAGGCAACAACATTTCCATGtgcaagaaaaacaagaagctCCTCTTAGCCCTCCTCGCTGCTCTGCTTCTCGTGGCTGCCATTATTGGCATTGTCGTCCACAACAGCGTCAACTCCATCCACAATAGCAATGTCGATTTCCCCCAGTCACACGCCATAATCAGAAGCTCTTGTAGCATCACATTGTACCCAGAACTGTGCTTCTCTGCCATTACCTCTGAACCTGATGCTGCAACCAGAGTCTCCAGCCAAAGAGACGTCATAGAGTTGTCTATAAACATCACAATCAGAGCAGTTCAGCACAATTACTTCACCGTCGAGAAGCTTTCGGCCAAAAAGGGCCTCTCCGATAGAGAGAAAACTGCTCTCCACGATTGCTTGGAGACCAGTGACGAGACGCTCGACGAGCTTCAGAAGACACTGATAGATCTCAGAGAGTACCCAAACAAGAAGTCCTTGATCCAGCACGCAAATGACCTCAAGACTCTCATCAGCGCCGCCATTACCAACCAAGTCACTTGCTTGGATGGGTTCTACGACGATGATAACAAGGAAATCAGGGAAGCTCTGCAAGATGGGCAGGTGCACGCGGAGCACATGTGCAGCAACGCATTGGCTATGATCAGGAACATGACGGATACCGACATTGCCAATTACGAGAAGGAAACCGGAATCACAAACAGGAAGCTGGTGGAGGATAAGCAGGGGATTGAGTGGCCGGAGTGGATGTCTGCGGGAGATAGGCGGCTTCTTCAGGCGGAGACGTTGGAGGCCGACGCGGTGGTGGCGCAGGACGGCAGTGGAAACTTCAGTACGGTGTCGGAGGCGGTGGAAGCTGCTCCTAAGAAGAGCGAGAagagatttattattaaaataaaagcaggGGTGTACAGAGAAAACGTGGAGGTGGGCAAGAAGAAGAcaaatattatgtttttggGAGAAGGGAGAAACGTTACCATTATTACCGCACACAGAAATTTCGTGGACGGAAGCACAACCTTTCACTCTGCCACAGTCGCTGCAGTGGGTGAAGGATTCATAGCCAAGGACATAGCCATCCAAAACACAGCAGGTCCCTCAAAGCACCAAGCAGTGGCACTTCGTGTTGGTGCTGATTTCGCAGCCTTCTACCGCTGTGACATTCTTGCATATCAAGACACCCTCTACGTCCATAGCAATCGCCAATTCTTCGTGGAGTGCCTAATTGCAGGCACAGTGGATTTCATATTTGGCAACTCAGCTGTTGTATTCCAAGACTGTGACATTCACGCTCGGCGTCCCAATGAAGGCCAAAAGAACATGGTCACAGCACAAGGGCGCATTGATCCTAATCAGAACACTGGCATTGTGATTCAGAAGAGTAGAATTGGTGCCACTGAAGATTTGGAGCCTGTCAAGGGAAGCTTCCCCACCTACCTTGGTAGGCCGTGGAAACAGTACTCTAGGACTGTGATCATGCAATCAACTATAAGTGATGTGATTGACCCCGTTGGTTGGCATGTGTGGAATGAGAGTAGTTTTGGCTTGAACACTTCGTTTTATAGGGAGTATGAGAACAGTGGCCCTGGTGCTGACACTTCAGCCAGGGTTAATTGGAAAGGGTTTAAGGTGATTACTGATGCTACTGAGGTTCTGCCTTTTACTACTGACCATTTCATTGCGGCTTCAACTTGGTTGAACACTACTGGGTTTCCGTTCTCTCTTGGGCTGTA 1736 0.4787 MRLRTSDLGNNISMCKKNKKLLLALLAALLLVAAIIGIVVHNSVNSIHNSNVDFPQSHAIIRSSCSITLYPELCFSAITSEPDAATRVSSQRDVIELSINITIRAVQHNYFTVEKLSAKKGLSDREKTALHDCLETSDETLDELQKTLIDLREYPNKKSLIQHANDLKTLISAAITNQVTCLDGFYDDDNKEIREALQDGQVHAEHMCSNALAMIRNMTDTDIANYEKETGITNRKLVEDKQGIEWPEWMSAGDRRLLQAETLEADAVVAQDGSGNFSTVSEAVEAAPKKSEKRFIIKIKAGVYRENVEVGKKKTNIMFLGEGRNVTIITAHRNFVDGSTTFHSATVAAVGEGFIAKDIAIQNTAGPSKHQAVALRVGADFAAFYRCDILAYQDTLYVHSNRQFFVECLIAGTVDFIFGNSAVVFQDCDIHARRPNEGQKNMVTAQGRIDPNQNTGIVIQKSRIGATEDLEPVKGSFPTYLGRPWKQYSRTVIMQSTISDVIDPVGWHVWNESSFGLNTSFYREYENSGPGADTSARVNWKGFKVITDATEVLPFTTDHFIAASTWLNTTGFPFSLGL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02046 578 Pfam Pectinesterase 266 563 IPR000070 GO:0030599|GO:0042545
Bva08g02046 578 PANTHER PECTINESTERASE 17 577 - -
Bva08g02046 578 Pfam Plant invertase/pectin methylesterase inhibitor 60 214 IPR006501 GO:0004857
Bva08g02046 578 PANTHER PECTINESTERASE 17 577 - -
Bva08g02046 578 Gene3D - 260 578 IPR012334 -
Bva08g02046 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 219 IPR035513 -
Bva08g02046 578 CDD PMEI-like_3 63 219 - -
Bva08g02046 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 43 218 IPR006501 GO:0004857
Bva08g02046 578 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Bva08g02046 578 SUPERFAMILY Pectin lyase-like 264 577 IPR011050 -
Bva08g02046 578 SMART PMEI_2 56 214 IPR006501 GO:0004857
Bva08g02046 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 219 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02046 Bva-Chr8 13611515 13615009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02046 16 578 Carbohydrate Esterase AT3G14310 67.238 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02046 K01051 - pvu:PHAVU_010G123100g 784.252