Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02041 ATGTGTGGAGGTGCTATTATCTCCGAATTCATTCCGGCGACGCCGGTGAGGTCTCGCCGTCTCACCGCCGATTACCTCTGGCCGGATTTGAAGAAATCCAGTTCAGGGAGGCACTTCTCAAAGCTCCTGAGGCCAGAGATTATCGATTTGGGCGATGATTTTGAAGCTGACTTCAGGGAATTCAAGGACGATTCTGATATCGATGTGGATGATGATGAGGATTTCATGGTCGATGTCAAGCCCTTTACTTTCTCAGCTGCCAAGCCTTCCAAGGGTGGTCTTTCTCGGGGATCTGCAAATGTTAAACCCACTGAACTTACTGGGCAAGCtgcaaagagaaagaggaagaatcAATATAGGGGAATCCGCCAGCGTCCATGGGGTAAATGGGCAGCTGAGATACGCGATCCAAGAAAGGGGGTTCGTGTCTGGCTTGGAACCTTCAACACAGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCAAGGAGGATTCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGATGCTCCAGGTGCTTCCCCAAAACGTTCTAAGGCAAATCCTGGTAAACAGAACTCTGCTCAGTCCATTGCCGACTTCAGTGCTGCTGCTAACAACTTTGAGGACTACTACGGTCTGGTTGAAGAGAAACCAATGGTTAATCAGTATACTAACATGGGCTTCTTCCCTGCCAATGGTGATGGACTCACATCCCTTGCACCATCCGATGATGTTACCTTCTGTTTCAGTTCTGATCAGGCGAGTAACTCGTTTGATCATTCAGACCTTGCATGGAGCGAACAGGGCTCCAAGACTCCTGAAATCTCATCCATGCTGTCAGCTCCCATGGAGGATGAAACTCAGTTTGTTCAATATGCAAGCCCAAAAAGCCTGCAATCTAACTCTCAGGATGTGATTTCTGCTCAAGAAAATTCTGGGAAGACACTGTCTGAGGAGCTTGCTGACATTGAATCTCAGTTGAAGTACTTTCAGGGACCTTATCTTGAAGGAGGCTGGGATGATGCTTCGTTGGAGACCTTGCTCAGCGGAGATGCTACTCAGGATGCTGGAAACCCAATGAACCTTTGGAGCTTTGATGACCTTCCTTCCATGGCCGGAGGAGTTTTCTG 1136 0.4762 MCGGAIISEFIPATPVRSRRLTADYLWPDLKKSSSGRHFSKLLRPEIIDLGDDFEADFREFKDDSDIDVDDDEDFMVDVKPFTFSAAKPSKGGLSRGSANVKPTELTGQAAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDDAPGASPKRSKANPGKQNSAQSIADFSAAANNFEDYYGLVEEKPMVNQYTNMGFFPANGDGLTSLAPSDDVTFCFSSDQASNSFDHSDLAWSEQGSKTPEISSMLSAPMEDETQFVQYASPKSLQSNSQDVISAQENSGKTLSEELADIESQLKYFQGPYLEGGWDDASLETLLSGDATQDAGNPMNLWSFDDLPSMAGGVF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02041 378 PANTHER EREBP TRANSCRIPTION FACTOR 1 372 - -
Bva08g02041 378 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Bva08g02041 378 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Bva08g02041 378 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Bva08g02041 378 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
Bva08g02041 378 MobiDBLite consensus disorder prediction 169 196 - -
Bva08g02041 378 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Bva08g02041 378 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Bva08g02041 378 PANTHER DNA-BINDING DOMAIN 1 372 IPR044808 GO:0003700|GO:0009873
Bva08g02041 378 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Bva08g02041 378 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02041 Bva-Chr8 13585321 13587983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02041 1 378 AP2-EREBP Transcription Factor Family AT3G14230 43.382 9.16e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva08g02041 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02041 K09286 - zju:107435298 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02041 08 13585321 13587983 Bva08g02041 08 13585321 13587983 ECH