Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02029 ATGCAATCTGAAATCGGGTCGTTTTTGAACCCATTGGGCTGGACATCGTGGATCCCCAATGTGGACCCGGCCGATACAATATTTTATGCAGAATACCAGAACACTGGGCCTGGATCGGACGTGACCGGAAGGGTTAAATGGGCCGGGTACAAGCCCACTCTGACGGTTGACGAGGCAACGAAGTTCACCGTGGAATCCTTAATCCAAGGAAGTGTATGGTTGCCCTTGGCAGATTCCTCTATGCATTATGACTCCAAACTATG 263 0.5019 MQSEIGSFLNPLGWTSWIPNVDPADTIFYAEYQNTGPGSDVTGRVKWAGYKPTLTVDEATKFTVESLIQGSVWLPLADSSMHYDSKL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02029 87 SUPERFAMILY Pectin lyase-like 1 78 IPR011050 -
Bva08g02029 87 PANTHER PECTINESTERASE 1-RELATED 1 82 - -
Bva08g02029 87 Pfam Pectinesterase 1 70 IPR000070 GO:0030599|GO:0042545
Bva08g02029 87 Gene3D - 1 84 IPR012334 -
Bva08g02029 87 PANTHER PECTINESTERASE 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02029 Bva-Chr8 13526091 13526354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02029 1 75 Carbohydrate Esterase AT1G53840 57.333 6.57e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02029 - - qsu:112021181 137.502