Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02027 ATGGTGACGGCACAAGGATGCGGTGACCCTACCCAGAACACTGGCATTGTAATCCAGAAGTGTAGAATTGGGGGCACCAGTGATTTGCTGCCCGTGATTAGCAGCTTCCCTAGCTACCTCGGGAGGCCATGGAGAGAATACTCAAGGACTGTGGTGATGCAAACAAGTATAAGTAATGTGATTGCGCCGCAAGGGTGGCATCAGTGGGATAGGGATTTTGCATTGAACACTTTGTTCTATGCAGAATATCAAAACACTGGGGCCGGTGCCGATACCTCTAGGAGGGTCAATTGGAGAGGGTTTAAGGTCATTACCAGTGCTTCTGAGGCCCAAGCTTATACTCCTGGTAGGTTTATTGCAGGCTCTAGTTGGTTGGGCTCTGCCGGCTTTCCCTACTCCCTTGGGCTTTA 410 0.5049 MVTAQGCGDPTQNTGIVIQKCRIGGTSDLLPVISSFPSYLGRPWREYSRTVVMQTSISNVIAPQGWHQWDRDFALNTLFYAEYQNTGAGADTSRRVNWRGFKVITSASEAQAYTPGRFIAGSSWLGSAGFPYSLGL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02027 136 PANTHER PECTINESTERASE 1 135 - -
Bva08g02027 136 PANTHER PECTINESTERASE 1 135 - -
Bva08g02027 136 Pfam Pectinesterase 1 121 IPR000070 GO:0030599|GO:0042545
Bva08g02027 136 Gene3D - 1 136 IPR012334 -
Bva08g02027 136 SUPERFAMILY Pectin lyase-like 2 135 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02027 Bva-Chr8 13521571 13521981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02027 1 136 Carbohydrate Esterase AT3G14310 70.588 1.53e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02027 K01051 - vvi:104880619 229.95