Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02024 ATGGCTGACTCACAAGAAGGATCGGGTGATTCGCGGAGCTTTGGAATCTTTGTCATAATTATGATGACAATAATAGCGATCATCTTCTTGGTggttgtgtttatttttttcctccatCTCTACGCCAATTGGTGCCGACGGCGCGCTGAACGAACCGCCACTGGAAGCCGCCATCGCAACCGGTTAGTCTTTGCGGCCGGTCAAGATCCACAAGGCCAGAGAAGAGGGCTCGATCCTGAAATCCTTAGGTCCTTACCAGTGTTAATTTTCCAGCAAGACGAGTTCAAAGATGGTTTGGAATGTGCCGTTTGCCTTTCTGAGCTTGTTGAAGGGGAAAAAGCGAGGCTTTTACCCAAATGCAATCATGGGTTTCACGTAGATTGCATAGATATCTGGTTCCAATCCCACTCTACTTGCCCAATTTGTAGAAACCCAGCTGTTTCTGAATCCTCGAAATGCAGTACTAGTTCTGGTGTTGAAGAAAATGCCTCTGAGAATGGTAACCAATCATCAAACTCAGCTGTGAATAGCTCAACGTCTACAAATTTTCCCACAAATGTATCTAGTAATGGAAACCAGACTCGAGCAAGTTCCGTTGGTGCTTctttagaagaaaaacttCCTTCATTTCAACCACCGTGTTCCTCGTCTTCCTCAGCAGGTACTAGTGGCAATAGGGGTCATGGAATGTTGACGATTGATATACCAAGTGAGATCAATTCATCGTCTTCGTTGTCCCCCGCGAGCAGGTTTGCTGCGGACGAGCAGATATCGCCAATGATGACGAGTTTAAAGTCATTCAAGAGGCTTTTAAGCTGGAACAGAAGATCAAGTCCATGCAGTCCCGGTTCAATTGATGTGGAACAATCAGGAAGGGGACAAATCTA 887 0.4419 MADSQEGSGDSRSFGIFVIIMMTIIAIIFLVVVFIFFLHLYANWCRRRAERTATGSRHRNRLVFAAGQDPQGQRRGLDPEILRSLPVLIFQQDEFKDGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDIWFQSHSTCPICRNPAVSESSKCSTSSGVEENASENGNQSSNSAVNSSTSTNFPTNVSSNGNQTRASSVGASLEEKLPSFQPPCSSSSSAGTSGNRGHGMLTIDIPSEINSSSSLSPASRFAADEQISPMMTSLKSFKRLLSWNRRSSPCSPGSIDVEQSGRGQI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02024 295 MobiDBLite consensus disorder prediction 153 200 - -
Bva08g02024 295 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 289 IPR044675 -
Bva08g02024 295 Pfam Ring finger domain 100 143 IPR001841 -
Bva08g02024 295 SUPERFAMILY RING/U-box 81 147 - -
Bva08g02024 295 MobiDBLite consensus disorder prediction 153 230 - -
Bva08g02024 295 MobiDBLite consensus disorder prediction 209 226 - -
Bva08g02024 295 PANTHER RING-H2 FINGER PROTEIN ATL3 4 289 - -
Bva08g02024 295 MobiDBLite consensus disorder prediction 275 295 - -
Bva08g02024 295 CDD RING-H2_EL5_like 100 143 - -
Bva08g02024 295 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Bva08g02024 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 147 IPR013083 -
Bva08g02024 295 SMART ring_2 101 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02024 Bva-Chr8 13507553 13508807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02024 59 272 C3H Transcription Factor Family AT1G53820 43.860 1.26e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02024 - - jre:109020298 261.536