Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02020 ATGGCTAtaatcttctccttcttcttcttcacggCCATCGTTGTCGCGTGCTTGCTGCGAAAACACATCAATTGGCTGCAGAAACTTTGCCATTTTAATGGTCATGCTGCTGCTGGTGTTGGAGAAGAAGATGGAGAGAAGATTAAAAAGTATGGAGCTGATTTTTGTGCAGTATGTTTAAGCCAAACCTGCCATGGAGAAGAGATTAAAACGTTACCAGTATGCTACCACAGTTTCCATGTTGATTGTATTGATGCCTGGTTGAAGAATCATAGCACATGCCCTCTCTGCAGGAACAAAATCAGTGATAATCTCAACCATGATCTTAATCAAGGGAAAAGCTTGAGAGACTCTGTGGTTGGTCTCATCCAGAACTTTTCTGCtctattttcaactttttgttGTCTGGCATTTCAACCCAAAATTGTGTGGGAGACTTTTCACtatgtttttta 455 0.3714 MAIIFSFFFFTAIVVACLLRKHINWLQKLCHFNGHAAAGVGEEDGEKIKKYGADFCAVCLSQTCHGEEIKTLPVCYHSFHVDCIDAWLKNHSTCPLCRNKISDNLNHDLNQGKSLRDSVVGLIQNFSALFSTFCCLAFQPKIVWETFHYVF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02020 151 Pfam Ring finger domain 56 98 IPR001841 -
Bva08g02020 151 PANTHER RING-H2 FINGER PROTEIN ATL3 55 108 - -
Bva08g02020 151 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 55 108 IPR044675 -
Bva08g02020 151 SMART ring_2 56 97 IPR001841 -
Bva08g02020 151 SUPERFAMILY RING/U-box 55 104 - -
Bva08g02020 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 107 IPR013083 -
Bva08g02020 151 ProSiteProfiles Zinc finger RING-type profile. 56 98 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02020 Bva-Chr8 13500184 13500905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02020 1 101 Carbohydrate Esterase AT3G14320 36.066 3.73e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02020 - - gmx:100500375 119.398