Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02010 ATGGTCACTGCGATGGAATCCCCATTACCCCTAACCCAATCTGCTCATTCGAGATTGGCTCATGACACCCTTTtagcttcttcttcctctactCCCTTTCCTGCACATTCATTCATGAAGAAGGACAGAAAAGTTTCCTTCTGGATAACTGTTCTGATGACAAGGGAAAGTCCCACAGAAAGACCAACAACTACTCCATCAACATCAACAAGACCATATTCTTCTTCGTGTTCATTCTACATGGTTTTGAAGTTGATGGTCTTTGTCGTAATACCGTTGCTTCTGTCTTGTTTCATTGTTACAGCCTCTTCCTCTTGTAACCAACGGGACAAAGACTCACTCTGGGTTTTCTACAGCAACCTATCCACGTCTTCTAATCTTCCTCTCAACTGGTCTACTTATACTGATTGCTGTAATTGGGAAGGCATTGCTTGCGATACTGGTGATGATAATGGGGACCGGCGGGTCATCCAGCTGGTGCTACCCTTTAGGGGTCTCAGTGGCTCCATTTCCTCATCTCTCACAAACCTCACCAATCTTTCTACGCTTAATCTCTCCCATAATCGGTTTTCTGGTACTCTACCAGCCcaatttttttcacttcttaATCGCCTGCAGATTCTTGATTTAAGCTACAATAGTCTCTCTGGTGAATTGCCACCCTTTGATGCTAACAGCAGCAGCAGTTCTGTCCAGGAGATGGATTTGTCTAGTAACATATTCCATGGAATAATACCATCTTCTGTACTTGAGAATCTTGCGGCTGCAGCAGCAGGAGGGAGTTTGACATCTTTTAATGTTAGTAACAATAGTTTCACAAGTCAAATtcccatctctttcttttgcattaaTGAGAATAACTCATCCTCAGTAAGATTCTTGGATTTTTCCTCCAACAAATTCATTGGTAATATTCCACATGGACTAGGATCATGTTCGAAGCTTGAGAAATTTCAAGCAGGTTTTAATTCTCTATCTGGGAATATTCCTAGTGATGTTTTTGATGCTACAGCCCTCCAAGTTCTATCTTTGCCCCTCAATAAAATCTCTGGAACCATTGACAATGGCATCACGAGCCTTGCCAACCTCACAGTTCTGGACCTCTACTCTAACCTTTTCGTTGGTTCCATTCCCCAGGATATTGGTAAGCTCTCTAACTTAGTACAGCTACAGCTTCATATCAACAATTTGACTGGTACTCTGCCACCATCTTTGAGCAATTGTGTCAATCTTGTCATATTGAATTTAAGAGTCAACTCCTTGGGAGGAAACCTCTCGGAATTCAATTTCTCCAGACTTGTCCGACTTACTACACTTGACCTTGGCAACAATAACTTTACTGGTAATTTGCCACCAACCCTTTATGCATGCAAGTCACTTTCTGCCATAAGACTAGCATCTAATCAGCTTGAGGGACAGATCTCTCCTGGCATACTCGAGTTGCAGTCTTTGTCCTTTTTATCCATTTCTACCAACTACCTAAGTAATTTCACTGGTGCACTGAGGATACTCACTGGGCTGAAGAACCTTAGTACCCTCGCCCTCTCCAAGAACTTTTTTGGTGAAATGATTCCAGATGATGTGAACATAATAGGCCCAGATGACTTCCAAGAACTCCAAATTCTAGCCCTGGGTGGTTGCAATTTTACAGGTCGAATACCAGCCTGGCTTTCAAAGCTTAATAAACTTGAGGTCGTGGACCTGTCCTATAATCAACTCACTGGTTCAATTCCTCCTTGGTTGGGGACACTTCCTCAGCTTTTCTACTTGGACTTGTCTGTCAACCTCATTACAGGAGTATTTCCTATAGAGCTCACAGGACTTCCAGCACTAACATCACAACAGGTGAACGATAAAGTGGAAAGGACTTACCTGGAGTTACCCCTCTATGTTGCTCCTACCAATACTACCCTGCTGCAGTATAATCAGCCTTCCAATCTTCCACCAGCAATATATCTAGGGAACAACAGCATCAGTGGCAGCATACCCATCGAGATTGGCCAACTGAAAGTCCTCAATCAGCTATATCTGAATCATAACAACTTCTCCGGAAGCATTCCTGTTCAAATTtctaacttgactaacttAGAGAGATTGGACCTCTCAGGAAATCGACTATCTGGTGAAATTCCTGCTTCACTCAAAAGCTTACATTTCTTGTCTTCTTTCAGTGTGGCAAATAATGATCTTCAAGGGGAGATACCAAATGGAGGTCAATTTGATACTTTTCCCGCATCCAGCTTTGAAGGAAATCCACAGTTGTGTGGTTCAGCTGCTCAACGCTCTTGTCCAAATCAACCAAATGGTAGTAGTGCAGCTAACTGGCACAGTCGctcaaacaaaaaagtaattctCGGGCTGGTTCTTGCAGTCTTTATTGGCACTGTCTTTATCATGACTCTGTTGATACTTTGGATACTATCCAAGAGGAGGATCAATCCAGGGGGAGACCCTGACAAGATCGAAATGGAATCAATTTCTGCCTACTCCAACAGTGGGGTTCATCCGGAGGTTGATAAGGAGGCTAGCCTGGTGGTATTGTTCCCTAATAAAGCAAATGAAACCAAGGATCTTACAGTATCTGAAATTTTAAAGGCCACTGAAAATTTTAGTCAAGCAAACATAATTGGTTGTGGCggttttggtttggtttacAAGGCAACATTACCAGATGGAACTAAGGTAGCAATCAAGAAACTTTCTGGGGACATGGGGCTGATGGAAAGGGAATTTAAAGCTGAGGTAGAGGCTTTGTCAACAGCCCAACATGAGAACCTGGTGGCATTGCAAGGTTACTGTGTGCATGATGGTTTTAGGCTTCTCATATATACTTACATGGAAAATGGAAGTCTAGATTATTGGTTACATGAAAAGCTTGATGGTGCATCTCAACTAGATTGGCCAACACGGCTGAAGATTGCACAAGGTGCAAGCCGTGGAGTGGCTTACATGCACCAGATATGTGAACCACACATTGTACATCGTGATATAAAGTCAAGCAACATCCTCCTTGATGAAAAGTTTGAGGCACGTGTAGCTGATTTTGGGTTGTCCAGATTTGTTCTTCCTTATCACACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCAGAATATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTATACAGCTTTGGGGTTGTTATGCTAGAGCTGCTCACTGGGAGGAGGCCTGTTGAGGTATGCAAGCCAAAAATGTCAAGGGAGTTGATTGGCTGGGTGCAACAGATGAGGAATGAAGGAAAACAAGAGCAAGTCTTTGACCCTCTTCTGAGAGGGAAAGgttttgaagaagaaatgctGCAGGTTCTTGATGTGGCCTGCATGTGTGTCAGCCAGAATCCTTTCAAGAGACCAACCATCAGAGAAGTTGTTGATTGGCTGAAGAACGTAGGACCAGCCAAACAACACCAGAATAAAGACTA 3464 0.4174 MVTAMESPLPLTQSAHSRLAHDTLLASSSSTPFPAHSFMKKDRKVSFWITVLMTRESPTERPTTTPSTSTRPYSSSCSFYMVLKLMVFVVIPLLLSCFIVTASSSCNQRDKDSLWVFYSNLSTSSNLPLNWSTYTDCCNWEGIACDTGDDNGDRRVIQLVLPFRGLSGSISSSLTNLTNLSTLNLSHNRFSGTLPAQFFSLLNRLQILDLSYNSLSGELPPFDANSSSSSVQEMDLSSNIFHGIIPSSVLENLAAAAAGGSLTSFNVSNNSFTSQIPISFFCINENNSSSVRFLDFSSNKFIGNIPHGLGSCSKLEKFQAGFNSLSGNIPSDVFDATALQVLSLPLNKISGTIDNGITSLANLTVLDLYSNLFVGSIPQDIGKLSNLVQLQLHINNLTGTLPPSLSNCVNLVILNLRVNSLGGNLSEFNFSRLVRLTTLDLGNNNFTGNLPPTLYACKSLSAIRLASNQLEGQISPGILELQSLSFLSISTNYLSNFTGALRILTGLKNLSTLALSKNFFGEMIPDDVNIIGPDDFQELQILALGGCNFTGRIPAWLSKLNKLEVVDLSYNQLTGSIPPWLGTLPQLFYLDLSVNLITGVFPIELTGLPALTSQQVNDKVERTYLELPLYVAPTNTTLLQYNQPSNLPPAIYLGNNSISGSIPIEIGQLKVLNQLYLNHNNFSGSIPVQISNLTNLERLDLSGNRLSGEIPASLKSLHFLSSFSVANNDLQGEIPNGGQFDTFPASSFEGNPQLCGSAAQRSCPNQPNGSSAANWHSRSNKKVILGLVLAVFIGTVFIMTLLILWILSKRRINPGGDPDKIEMESISAYSNSGVHPEVDKEASLVVLFPNKANETKDLTVSEILKATENFSQANIIGCGGFGLVYKATLPDGTKVAIKKLSGDMGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKLDGASQLDWPTRLKIAQGASRGVAYMHQICEPHIVHRDIKSSNILLDEKFEARVADFGLSRFVLPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVEVCKPKMSRELIGWVQQMRNEGKQEQVFDPLLRGKGFEEEMLQVLDVACMCVSQNPFKRPTIREVVDWLKNVGPAKQHQNKD 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02010 1154 MobiDBLite consensus disorder prediction 756 775 - -
Bva08g02010 1154 Gene3D Ribonuclease Inhibitor 359 428 IPR032675 -
Bva08g02010 1154 Gene3D Ribonuclease Inhibitor 109 228 IPR032675 -
Bva08g02010 1154 Pfam Protein kinase domain 871 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02010 1154 Gene3D Phosphorylase Kinase; domain 1 834 945 - -
Bva08g02010 1154 SMART LRR_typ_2 360 383 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 433 457 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 177 201 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 560 584 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 669 692 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 202 226 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 384 408 IPR003591 -
Bva08g02010 1154 SMART LRR_typ_2 693 717 IPR003591 -
Bva08g02010 1154 Gene3D Ribonuclease Inhibitor 429 770 IPR032675 -
Bva08g02010 1154 SUPERFAMILY L domain-like 285 614 - -
Bva08g02010 1154 SUPERFAMILY L domain-like 639 755 - -
Bva08g02010 1154 Pfam Leucine Rich Repeat 695 717 IPR001611 GO:0005515
Bva08g02010 1154 ProSitePatterns Protein kinases ATP-binding region signature. 876 899 IPR017441 GO:0005524
Bva08g02010 1154 SUPERFAMILY L domain-like 131 374 - -
Bva08g02010 1154 ProSiteProfiles Leucine-rich repeat profile. 695 717 IPR001611 GO:0005515
Bva08g02010 1154 Pfam Leucine rich repeat N-terminal domain 108 146 IPR013210 -
Bva08g02010 1154 Gene3D Ribonuclease Inhibitor 229 356 IPR032675 -
Bva08g02010 1154 SUPERFAMILY Protein kinase-like (PK-like) 856 1141 IPR011009 -
Bva08g02010 1154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 88 1142 - -
Bva08g02010 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
Bva08g02010 1154 ProSiteProfiles Protein kinase domain profile. 870 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02010 1154 Gene3D Transferase(Phosphotransferase) domain 1 946 1154 - -
Bva08g02010 1154 PRINTS Leucine-rich repeat signature 205 218 - -
Bva08g02010 1154 PRINTS Leucine-rich repeat signature 693 706 - -
Bva08g02010 1154 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
Bva08g02010 1154 PANTHER OS02G0155400 PROTEIN 88 1142 - -
Bva08g02010 1154 SMART serkin_6 870 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02010 Bva-Chr8 13446509 13450483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02010 85 801 Miscellaneous Gene Families AT1G17240 52.144 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva08g02010 Pkinase 5.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02010 - - gmx:100781943 1556.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02010 08 13446509 13450483 Bva08g02010 08 13446509 13450483 ECH