Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02004 ATGGGCAGCCTAGAAGAAATACTGAAAAAAATGCCAGTGGGATTCAGATTCCAACCCACAGATGAAGAGCTTGTCAATTACTTTCTCAAGCACAAGCTGTTGGGTGAGAATTTACGTGTCAGGTTTATTCGTGAGATTGACATTTGCAAGTTTGAACCTTGGGACTTACCAGagctTTCGGTGGTGAAATCGGATGACCAGTGGTTTTTCTTCAGTCCTCGTGATTTGAAGTATTCAAACAGTAATCGGCGTAACAGGGCAACCAAAGCTGGGTTCTGGAAAGCCACTGGGAAAGACCGTAATGTGAAAAAAAGAGGTACCAACAATGTCATTGGAACGAAGAAGACTCTGGTTTTCTACGAAGGTCGTGTTCCTCAAGGCATCAAGTCCAACTGGGTTATTCATGAATACCACGCAACTACCTTTCCTGCTGACCTTAGGACCTATGTTTTATGTCGCTTGATGAAGAAACCTGGGAAGAAAACAGAAGAGGGAACTGATGGATTGATCTATATTGAAGGAGAGCCAAGTAGCCATATggcctctgactatgaaaatCAAGCAACAGTGTTTCAAATTCCAGATgtgAATAGTTTGGAAGAAGCCAATCTGGAATCAGTCTTTACATTACCACCTCAGGCAGAGGAGTATGACTTTGTCTCTCTACAGCAGGAACAAGCTTTCTCAATTTCCTCTTTCCCCAATGCCTTGTTTGGAATTGCAAACGATGCTAATCAGTTTCTTCCTGAGACTACTGAAGAGGAAGACAATGATGCATTCTTGAATGCAATTATAGCTGGTGAGGATATTGTCTGCACCGAAGAAACGAGACGCACTTTTGTCACTGAATCCACCCCATCAGGGTCGTTGAGAAAGGTGTACTACGAAAGCAGTGATACAGAAGCTGAAGTAATCTCAGCACGGTCTAGCACAGTTCTGGACGGTCCAACAGCGTGTAGCCAGCATGCTGGTTCAAGGGAATACTGGGTAATGAAAATGTTTACATCGTCTCATGGTGCTCTACATGCTGGCTCTCTGTTAGCTTCTAACCGAGAAGtgaatagagagaaaaaggacAGTATTCATAATGATTTCTGGGAAGTGGACACTTTCAGTGGCGACTCCCCTAAAGATCAATGTTTGCCTATCAACTGTGTTTCAATTGATAGCTCTCCTTCCCCTCCAAGGAGATACAAAGTTCAGTATCATCCAAAATCAGACAACTCTGTATCACAGAAAGCTTCAGCAAGCAGGCGATCACAGAAGAAGGTTTCAAGCAaagaaatttccaaaaatgAGGCTCTGAAGGAGACGTACATAGTTCAATCAAACAAAGATCAGGGAAAAATTCTGGGTACCAGTTCTGGGAAGAATCCGCAAAAAACAAGCATTGGGTCATCTGAGGTTGACAGAAAGGGGTCTTTCATCTACTGGGAGACACCATCTAGCCAAAAACTATATCCTCGGTCAGCATATCTTGTCAACGTAGTTCTTGGGTTTTCTTTGCTAATAGTCAGTTTTTGGGATTTGGTATCATCAAGGAACTG 1547 0.4144 MGSLEEILKKMPVGFRFQPTDEELVNYFLKHKLLGENLRVRFIREIDICKFEPWDLPELSVVKSDDQWFFFSPRDLKYSNSNRRNRATKAGFWKATGKDRNVKKRGTNNVIGTKKTLVFYEGRVPQGIKSNWVIHEYHATTFPADLRTYVLCRLMKKPGKKTEEGTDGLIYIEGEPSSHMASDYENQATVFQIPDVNSLEEANLESVFTLPPQAEEYDFVSLQQEQAFSISSFPNALFGIANDANQFLPETTEEEDNDAFLNAIIAGEDIVCTEETRRTFVTESTPSGSLRKVYYESSDTEAEVISARSSTVLDGPTACSQHAGSREYWVMKMFTSSHGALHAGSLLASNREVNREKKDSIHNDFWEVDTFSGDSPKDQCLPINCVSIDSSPSPPRRYKVQYHPKSDNSVSQKASASRRSQKKVSSKEISKNEALKETYIVQSNKDQGKILGTSSGKNPQKTSIGSSEVDRKGSFIYWETPSSQKLYPRSAYLVNVVLGFSLLIVSFWDLVSSRN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02004 515 MobiDBLite consensus disorder prediction 404 419 - -
Bva08g02004 515 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Bva08g02004 515 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Bva08g02004 515 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Bva08g02004 515 MobiDBLite consensus disorder prediction 387 429 - -
Bva08g02004 515 SUPERFAMILY NAC domain 10 157 IPR036093 GO:0003677|GO:0006355
Bva08g02004 515 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 441 - -
Bva08g02004 515 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 441 - -
Bva08g02004 515 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02004 Bva-Chr8 13416663 13419655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02004 1 158 NAC Transcription Factor Family AT4G35580 55.488 4.74e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g02004 NAM 9.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02004 - - gsj:114390609 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02004 08 13416663 13419655 Bva08g02004 08 13416663 13419655 ECH