Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02002 ATGGAGCTGATGCAAGAAGCTGGCAAAGGGTACTCTgatagagaagaagaagaggaagaggaattAGAGATAAGAGAAGTTGAGCAAATTAGCAGGTTACACCACCAGCAAGATGCAGCAGCTACCAATATCAATTTCAAACACAGGAAGCTAGATGACTTGATGGAGTTATCGCTTGGGAATAACAACAAAGACGATGAAGCTAATTTCCATGGCGGAGGAGGAGCAGGTTGTAGCAGCAGCAGTGGCGgcactaataataataaaaatgatccTATTGAGAAGGAGCACATGTTTGATAAAGTGGTGACGCCAAGTGATGTTGGCAAACTCAACCGGCTGGTGATTCCCAAGCAGCATGCCGAGAAGTATTTCCCCCTTGACTCCTCCACCAACGAGAAAGGTCTTCTTCTTAATTTCGAGGACCGGAACGGCAAGTTATGGCGGTTCCGGTACTCATACTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGTTTTGTCAAGGAGAAAAAGCTTGATGCCGGTGACATTGTCTCATTCCAGCGAGGTGTTGGCGAATTGTACAGACATATATTGTACATAGATTGGCGGCGCCGGCCTGATCATGGCCCGGATCCCGCCGCCACGCTGATTACACCTTTCTTCTTCACAATCAGCAGCATTTACCACAGTATTCCATTCGGTGGAGTGGCAGATTGTACTCGCTGCCCACGCAGGGGCCGGGGTCTATCCCCCGGAACCAGCACGAGTATCTTCAACTTCAGCACTTG 782 0.4642 MELMQEAGKGYSDREEEEEEELEIREVEQISRLHHQQDAAATNINFKHRKLDDLMELSLGNNNKDDEANFHGGGGAGCSSSSGGTNNNKNDPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELYRHILYIDWRRRPDHGPDPAATLITPFFFTISSIYHSIPFGGVADCTRCPRRGRGLSPGTSTSIFNFST 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02002 260 SMART B3_2 99 204 IPR003340 GO:0003677
Bva08g02002 260 Pfam B3 DNA binding domain 99 202 IPR003340 GO:0003677
Bva08g02002 260 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 69 210 - -
Bva08g02002 260 SUPERFAMILY DNA-binding pseudobarrel domain 96 195 IPR015300 -
Bva08g02002 260 MobiDBLite consensus disorder prediction 75 89 - -
Bva08g02002 260 ProSiteProfiles B3 DNA-binding domain profile. 99 199 IPR003340 GO:0003677
Bva08g02002 260 MobiDBLite consensus disorder prediction 1 21 - -
Bva08g02002 260 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 69 210 IPR044800 GO:0003700
Bva08g02002 260 Gene3D - 93 208 IPR015300 -
Bva08g02002 260 MobiDBLite consensus disorder prediction 65 93 - -
Bva08g02002 260 CDD B3_DNA 97 186 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02002 Bva-Chr8 13402684 13404937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02002 92 205 B3 DNA Binding Superfamily AT1G01030 86.957 5.21e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva08g02002 B3 2.6e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02002 - - gmx:100778733 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02002 08 13402684 13404937 Bva08g02002 08 13402684 13404937 ECH