Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01997 ATGGACGCATACTCCTGTGGAGAAGAAATGGTTGTTAAGACAAGAAAACCATATACAATCACTAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGGTTCCTAGAAGCTTTAAGGCTCTATGGGCGAGCATGGCAGCGTATAGAAGAGCATATTGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGttggaGAAAGAGGCTCTTGTAAAAGGTGTTCCAATAGGTCAGGCAGTCGAGATAGACATCCCACCACCGCGGCCTAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGGTCAGCATTGGTACTCCTACATCAAATAATGGAGCGAAGGATGGAAAACTTATGCCACTTTCATCTTCACATAGTAAACAAGCATTAGACTTGGAGAAAGAACCTCTCCCAGAGaaaactAATGGAGATGAAGGGCTAACTGTACAAGAGAATAAGGACAAGAGCTGCTCCAAAGTATATACCATTCTTCAAGAGGCACCCTCTTCTTCTGTCTCTTCAGCAAACAAAAGTTCGTTATCAATTGCAGTGCCACTGAGAAATTCATACACTTTGAGAGAGTTCATACCATCAGTCAAAGAGGTAATAGCTCGGGATGAAACAAATGAGTCATTTCTTACTAttgaattcaaagaaaatcaGAAGTTGGAGATAGATGATGGCAAACACACAGAACAGAACAATGGCACGAGTAAAGCCTCTCAGTTGGAGAACTCTGATGCTTCGCATGTGAAATTGGCTCAGCAAGAGAAAACGGATGATCTCAATTGTGCATTGACAAAAGATGTGATGCAAGGTAATCAGAACTACCCTAGGCACGTCCCCGTGCATGTTCTTGATGGGAACCTTGGAACTAGTACACAAACTCCAACCCCAGATATGTCGTTCCAAGATTCCATAATTCACCCAATAGCAGGAGTAAATGGGCAACCCAATGTTTTCACAAATTCAGCTGCATCGAACACAAGTGAAAGTCAAAGTAATACAACAAGATCTTCTATTCATCAATCATTTCCTGCTTATCCTCCCTTCATGCCAATTCGCCATAATCAAGATGATTACCAATCATTTCTTCAAGCGTCCTCCACGATTTCAAGTCTTATTGTCTCTACCCTTTTGCAAAACcctgccgcccatgctgctgCAAGTTTTGCCGCTACATTTTGGCCCTATGCAAATGCTGAAACTTCTGTAGATTCTCCTGCATGCTCTCAAGGGGGTTTTCCATCCAGGCAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGACTGCTTCCTTTATGTGCTTCCCTTCATACTGCATTTACCTGTCCTCCTGCATCTGCAACGGCAGCCCTATCAATGGATAATGGACAGGCACAGGCTGAGAAGACAGAGAAAGGAGagaatattattgaaaatccTCCTACACAAGATCAGATACTGGATCCAGAATTCTCAGAAGCTCTACAAGCTCAACATTCAGCTTCTAAGTCACCAGCTGCTTCTTCATCAGATTCTGAGGAAAGCGGAGATGCCAAGTTAGACACTTCATCAAAGGCGACTGACCAAGAGAATAGCAAAGTGATTTCTGAGCACCCTGACTCCACTAAAACAAAGGGTAGAAAACAGGTTGACCGATCCTCTTGTGGCTCCAATACAGCCTCTAGCAGCGATGTAGAGACAGATGCATTAGAGAAGGAAGACAAACAGAAGGAAGATTCTAAAGCACCTGATCCAAGCCATTTAGCTACTGAGTTTAGTAATCGTCGTTGTAGAAGCATTACCAACATAACTGATTCTTGGAAGGAGGTTTCCGAAGAGGGGCGAATGGCCTTTCAGGCTCTTTTCTCCAGAGAGGTCTTGCCGCAGAGCTTTTCACCTCCGCATGACTTGACAAATACGGATAATCAGAAGGAGAACATTGAGGATGACAAGCAAAATATGGATGACAAAGATGAAGATCTCGAGAGCAAGAAATGCAGTTCTGATCGTGAAGGAATGTTGAGCAACCTGTCTCTTGTAGAAAACAACAATGAGGAGGAGGGACTGCTAACCATAGGGCTTGGACAAGGAAAGCTTAAAGCTCGTCGAACGGGGTTTAAACCTTACAAAAGATGTCGAATAGAGGCAAGAGAAAACATGATGGCAATTGGCAGCAACCAAGGTGAAGAGAAAGGTCCCAAGAGGATACGCTTGGAAGGGGAGGCTTCAACTTG 2282 0.429 MDAYSCGEEMVVKTRKPYTITKQRERWTEEEHNRFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAVEIDIPPPRPKRKPSNPYPRKVSIGTPTSNNGAKDGKLMPLSSSHSKQALDLEKEPLPEKTNGDEGLTVQENKDKSCSKVYTILQEAPSSSVSSANKSSLSIAVPLRNSYTLREFIPSVKEVIARDETNESFLTIEFKENQKLEIDDGKHTEQNNGTSKASQLENSDASHVKLAQQEKTDDLNCALTKDVMQGNQNYPRHVPVHVLDGNLGTSTQTPTPDMSFQDSIIHPIAGVNGQPNVFTNSAASNTSESQSNTTRSSIHQSFPAYPPFMPIRHNQDDYQSFLQASSTISSLIVSTLLQNPAAHAAASFAATFWPYANAETSVDSPACSQGGFPSRQIGSPPSMAAIAAATVAAATAWWAAHGLLPLCASLHTAFTCPPASATAALSMDNGQAQAEKTEKGENIIENPPTQDQILDPEFSEALQAQHSASKSPAASSSDSEESGDAKLDTSSKATDQENSKVISEHPDSTKTKGRKQVDRSSCGSNTASSSDVETDALEKEDKQKEDSKAPDPSHLATEFSNRRCRSITNITDSWKEVSEEGRMAFQALFSREVLPQSFSPPHDLTNTDNQKENIEDDKQNMDDKDEDLESKKCSSDREGMLSNLSLVENNNEEEGLLTIGLGQGKLKARRTGFKPYKRCRIEARENMMAIGSNQGEEKGPKRIRLEGEAST 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01997 760 MobiDBLite consensus disorder prediction 476 609 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 739 760 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 645 686 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 230 256 - -
Bva08g01997 760 PANTHER PROTEIN LHY 2 742 - -
Bva08g01997 760 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Bva08g01997 760 MobiDBLite consensus disorder prediction 657 685 - -
Bva08g01997 760 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Bva08g01997 760 MobiDBLite consensus disorder prediction 582 601 - -
Bva08g01997 760 SMART sant 23 71 IPR001005 -
Bva08g01997 760 CDD SANT 26 69 IPR001005 -
Bva08g01997 760 MobiDBLite consensus disorder prediction 328 348 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 88 158 - -
Bva08g01997 760 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Bva08g01997 760 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Bva08g01997 760 MobiDBLite consensus disorder prediction 530 566 - -
Bva08g01997 760 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Bva08g01997 760 MobiDBLite consensus disorder prediction 107 133 - -
Bva08g01997 760 Gene3D - 26 73 - -
Bva08g01997 760 PANTHER SWI/SNF COMPLEX-RELATED 2 742 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 511 529 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 240 256 - -
Bva08g01997 760 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Bva08g01997 760 Coils Coil 653 680 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 567 581 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 746 760 - -
Bva08g01997 760 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01997 Bva-Chr8 13380958 13387273 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g01997 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01997 K12133 - gmx:100271888 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01997 08 13380958 13387273 Bva08g01997 08 13380958 13387273 ECH