Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01994 ATGGAGAGGCTTCAAGGACCCATCAATTCCTGtTTCTTTGGGGAGCATCTGGAAGTGAACTGTTTAGAGCAAGGTTTCATTGATGCAGAGAGCTTGAGgctggaagaagaagaacaattttttatgcCAAGCTTAGAGGATAATATTCCATTTCTTCAGATGCTTCAGAGTGTAGAATCCCCACAGCTTTTTCCCTTAAAAGAGACAAACTTTCAAACACTTCTAAGGCTTCAGCACATGAAGAAGCCATGGGAAGAAAAATCCGGCATACCCCAAATGGATactcaaattcaaactttGGATGTTGAAAGCTGCGTTACCCATGACATGGTGGAAATGCAATCACCAGTGAAATCAGAAAGCAACTATTTTCAAAACCCGCATTCAGCTTCATGCGTTGAACCATTGGGTTCTGAGTGCAATCAAGAAGGGCCAAAATCAGCTGAAAATTGTAGCATAGACGCTAATGGAGGCTGTCCTGCAACTTGGGCTAATCCAGAATCATGGGTGAAGAAGACCCAGTGCCCCAAATCTCAGCTGGTTGGGCgtgaaaggagaaagagaaagagaacgaGACCAGCCAAGAACAAAGAAGATGTTGAGAACCAGCGCATGACTCACATTGCCGTGGAACGAAACCGGCGACGCCAAATGAATGACCATCTCAGTGTTCTGAGGTCCCTCATGCCCCCTTCCTATATTCAAAGGGGTGACCAAGCATCTATTATTGGAGGGGCAATAGACTTCGTGAAGGAATTGGAGCAGCTTCTTCAATCCCTTGAGTCacaaaaaagaatgagaaagaacgAAGAGATTGGTTGTTCTAGTGGGTTGTTCAAGCCATCTGCGTCTGGTTCTGGAATGAGTTTGACCATGGAAGAAGGAAGCTGCAGAGATGAGGTGAAAGCAGAGAACAAGTCAGAAACAGCTGACATAGAGGTGACCGTGATTCAATCCCATGTGAACATGAAAGTACAGTGCCAAAGGAGACCTGGGCAATTGCTAAAAGCCATTGTTGCTTTAGAGGATCTTAAGCTAACCATCTTGCATCTCAACATTACCTCCGCACAGGATTTAGtattctattcttttaatCTCAAGATAGAAGAAGATTGCAAGCTCGGGTCAGCAAATGAGATTGCAGAAGCAGTTCACCGTATTTTTAGCTTCATCAATGGTAACTG 1184 0.4105 MERLQGPINSCFFGEHLEVNCLEQGFIDAESLRLEEEEQFFMPSLEDNIPFLQMLQSVESPQLFPLKETNFQTLLRLQHMKKPWEEKSGIPQMDTQIQTLDVESCVTHDMVEMQSPVKSESNYFQNPHSASCVEPLGSECNQEGPKSAENCSIDANGGCPATWANPESWVKKTQCPKSQLVGRERRKRKRTRPAKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLESQKRMRKNEEIGCSSGLFKPSASGSGMSLTMEEGSCRDEVKAENKSETADIEVTVIQSHVNMKVQCQRRPGQLLKAIVALEDLKLTILHLNITSAQDLVFYSFNLKIEEDCKLGSANEIAEAVHRIFSFINGN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01994 394 Coils Coil 250 270 - -
Bva08g01994 394 PANTHER TRANSCRIPTION FACTOR BHLH70 18 393 - -
Bva08g01994 394 PANTHER MAX DIMERIZATION, MAD 18 393 - -
Bva08g01994 394 SMART finulus 208 259 IPR011598 GO:0046983
Bva08g01994 394 Gene3D - 193 275 IPR036638 GO:0046983
Bva08g01994 394 MobiDBLite consensus disorder prediction 174 200 - -
Bva08g01994 394 CDD bHLH_AtFAMA_like 205 276 - -
Bva08g01994 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 270 IPR036638 GO:0046983
Bva08g01994 394 Pfam Helix-loop-helix DNA-binding domain 203 254 IPR011598 GO:0046983
Bva08g01994 394 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 253 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01994 Bva-Chr8 13364734 13367497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01994 35 393 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 42.021 4.11e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g01994 HLH 3.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01994 - - gmx:100789928 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01994 08 13364734 13367497 Bva08g01994 08 13364734 13367497 ECH