Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01993 ATGCAATCCCACCCTCAAAACCAAATGGAAGCACAAATTTCTCAGCATGAACAAGTCATTGAAATCGGAGTGGATTTCCCTAATGGAAGAAGGACTCCTAAAATTTGTGGAGAAGCACCATGTGGATTTGCAGATGCTGGATCTGTTTCTAAGGATGCCAAAGAACGATCAACTTCCATGCGAAAAATTTTGACTGCTGTGGTTCTTTGTGTTATTTTCATGAGTATTGAAGTAGTTGGAGGTATCAAAGCTAATAGTCTTGCAATATTGACTGATGCAGCGCACTTGCTTTCAGATGTTGCGGCCTTTGCCATCTCCTTGTTCTCTTTATGGGCCGCTGGATGGGAAGCCAATCCACGTCAGTCATATGGGTTTTTCAGAATAGAGATTCTTGGTGCCTTGGTTTCTATACAGCTAATATGGTTACTTGCTGGTATTTTGGTGTACGAAGCCATTGAAAGACTCATTAATGGTACACGTGAGGTGAATGGCTTTTTGATGTTCCTAGTTGCTGCATTTGGTCTGGTGGTTAATATCATTATGGCTCTCTTACTGGGTCATGATCATGGCCACGGGCATGATGGACATGGACATGGACATAGTCATGGATTTGGCCATGGACATGGGCATGATCATGGATTTGTGAAGCATCCAAAAGATGAGCAGCAGCATCATACTCATGAAGATCACATGCACCATCATCATCACAATGAAGAGCATCCAAAAGATGAGCACCATTATTCTCATGATGATCTCACCGAAGCACTTATTGATGGATCCAGAAGCACTGAAAAGAAGAGGAACATAAATGTACAGGGGGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTATTGGGGTAATGATAGGCGGAGCAATCATATGGTATAAGCCTGAGTGGGTAATAGTTGATTTAATTTGCACCATTATCTTTTCGGTAATTGTTCTGGGGACAACCTTCAACATGCTAAGAAACATACTGGAAGTTCTGATGGAGAGCACACCCCGCGAGATAGATGCAGCAAAGCTTGAGAGGGAACTGTTGGACATGGATGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCCATTACAGTAGGGAAGGTTTTGCTGGCTTGTCATGTTAAAATCCAACCTGAAGTGAATGCAGACATGGTGCTAGACAAGGTTGTAGACTATATCAGAAGAGTTTATAATATCAGTCATGTGACTATACAGATAGAGCGCTA 1232 0.4253 MQSHPQNQMEAQISQHEQVIEIGVDFPNGRRTPKICGEAPCGFADAGSVSKDAKERSTSMRKILTAVVLCVIFMSIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERLINGTREVNGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDGHGHGHSHGFGHGHGHDHGFVKHPKDEQQHHTHEDHMHHHHHNEEHPKDEHHYSHDDLTEALIDGSRSTEKKRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEWVIVDLICTIIFSVIVLGTTFNMLRNILEVLMESTPREIDAAKLERELLDMDEVVAVHELHIWAITVGKVLLACHVKIQPEVNADMVLDKVVDYIRRVYNISHVTIQIER 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01993 410 MobiDBLite consensus disorder prediction 192 247 - -
Bva08g01993 410 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 9 410 - -
Bva08g01993 410 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 338 409 IPR036837 -
Bva08g01993 410 Pfam Cation efflux family 64 332 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva08g01993 410 Gene3D Cation efflux protein transmembrane domain 59 331 IPR027469 -
Bva08g01993 410 SUPERFAMILY Cation efflux protein transmembrane domain-like 57 333 IPR027469 -
Bva08g01993 410 TIGRFAM CDF: cation diffusion facilitator family transporter 60 410 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva08g01993 410 PANTHER METAL TOLERANCE PROTEIN A1 9 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01993 Bva-Chr8 13358329 13361352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01993 9 410 Inorganic Solute Cotransporters AT2G46800 68.537 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01993 K14689 - gmx:100790458 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01993 08 13358329 13361352 Bva08g01993 08 13358329 13361352 ECH