Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01991 ATGGGTGATGTGGTGGTGACCGGCGAAAAGGGGATGGAGGAGCTGGAATGGAGGACAGAAAAGGAGGATAAGAGCGAGAAGAAGGATGGTGAGTCTTCTCAAGTCGTTAGTTGGGACAAGTTTCTGCCCAGGATGGTGCTTAGAGTTCTGCTTGTCGAAGCTGATGATTCTACTCGACAAATTATTGCTGCCCTCCTCCGCAAATGCAGTTATAGAGTTACTGCAGTTGCCGATGGATTAAATGCATGGGAGACATTGAAGAGGAAAGCTCCTGATATAGATCTAATATTAACGGAAGTGGATTTGCCATCAATATCTGGATTTGCACTTCTTACTTTAATCATGGAGCATGACGTTTGCAAAAATATTCCTGTCATAATGATGTCTTCTGACGATTCAATTAGCATGGTGTTGAAATGCATGTTAAAAGGTGCTGCTGATTTTCTTATAAAGCCTGTTCGGAGGAATGAACTAAGGAACTTGTGGCAGCATGTATGGAGAAGGCATCATATTAGCGGGCATCCACAAAATATAACTTCTCCAAACAAAAAACTCGAGGCCTTCTCAGAAAACAATGCTGCAAGCTATCATTCTAGTGGTTCTGTGGCCTCCacacagaaaaataatgaatgcaCTGAGAAAGGGAGCGAGGCCCAAAGCTCTTGTACATCAACTTTTTTGGAAGCTGAGAGTGCATGCATGCAAAATATGCAGGGTCCATCCCAGCTGAATCACAGGAGCTATTCAAGTTTGAGCAACATTGACATAATGGGGAATGACGACTCTACCATACCAAAAAGGGAATCAATGAAGCATAAGAATGACACTGGAGAGAAGGCAACTACATTTGTGTCAGAGGCTGCAACATGCAACAAACCTTTTAACTCAATAGATTTAAAGTTGGAACAAGGTCATGGTTCTGCTAAAACAGAGACTCCAAGTGTGCCCTTTAGAGCAGTGGTAAGCAGAGGAAATCCTAATAGGGGTACTGAAATGAACGACTGCAACAATGAACTTGAAGAACCTTCTAGAGAAGCTATTGACTTGATTGCTACATTTGGGAGTCCTACGAAGAACATTGAGGGAAATAGCCTTATTGGTGGTGGCACAGACAAGTTTGATTTTGATCCGCAATTGGAGCTTTCTTTAAGAAGAGATTTTCCTAGTAGCTCATGTAAACAAGCAACCGAGGAAAGGCAAAGATTGAACCATTCTAATGCGTCTGCCTTTTCTTGGTATAGTGGTAGTAAGCTGTTGCAGCCCCTTTCTCCTACACCATCAAGTTCTGCTGAAGTAAATGACACTTGGTGGAATTCCCATGGATCCAATGAATTATCTAGAAATGCCATTGATACTTCTCAGTGTGGTGGTGCAAATCCCAGTCATGAGAATATGACCTCTCTGGTCATTGCTCAGTCTGTACAAGCTGAACTACAGTTGCCAAACGGTCAATTTGGATCACTTCCTTCTACAGGGGTTAATCACGATCATATGTCTAGCGAAAATGGTCATGTTCTTCTTTGTCATCCTATATGGAGTCCCAAACCAGTCtaccagaaagaaaattctccCATTCCCACAAGTTCATCTTTCCAGTCCTATCCTGAAAGTCACAAGTCGGATCAACGTTATCACTGGTCTGATGACGCCGCTTATTCTTCTCTTGATCAAACCGTACATGATAAAAGCAACTTGGATCCTATGAGGCTTGATTCTCCGGCTGCTGGTCAGAGTACCAGTAATAGCATATGTCATGATGCTGCAAATCATATTAATAGTAGTGCATACAGCGGAAGTGATGGAAATGCTACTTCAGCTATGGTAGTTGATAATACTCATGAAAATTTTAGTGATAGTGTTCGTCATAATTATGATGTACTTAGAGTTATGGACTCTCATCACGTCAGCCAAAGAGAAGCTGCTTTAACAAAGTTTCGATTGAAGCGGAAAGACAGATGCTTTGAGAAGAAGGTCCGATATCAAAGCCGTAAAAGACTGGCAGAGCAGCGGCCTCGGGTGAAAGGGCAATTTGTACGTCAAGTGCACAATGATAATGCAGTTGCTAATGCTGGTTA 2075 0.4164 MGDVVVTGEKGMEELEWRTEKEDKSEKKDGESSQVVSWDKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVTAVADGLNAWETLKRKAPDIDLILTEVDLPSISGFALLTLIMEHDVCKNIPVIMMSSDDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHHISGHPQNITSPNKKLEAFSENNAASYHSSGSVASTQKNNECTEKGSEAQSSCTSTFLEAESACMQNMQGPSQLNHRSYSSLSNIDIMGNDDSTIPKRESMKHKNDTGEKATTFVSEAATCNKPFNSIDLKLEQGHGSAKTETPSVPFRAVVSRGNPNRGTEMNDCNNELEEPSREAIDLIATFGSPTKNIEGNSLIGGGTDKFDFDPQLELSLRRDFPSSSCKQATEERQRLNHSNASAFSWYSGSKLLQPLSPTPSSSAEVNDTWWNSHGSNELSRNAIDTSQCGGANPSHENMTSLVIAQSVQAELQLPNGQFGSLPSTGVNHDHMSSENGHVLLCHPIWSPKPVYQKENSPIPTSSSFQSYPESHKSDQRYHWSDDAAYSSLDQTVHDKSNLDPMRLDSPAAGQSTSNSICHDAANHINSSAYSGSDGNATSAMVVDNTHENFSDSVRHNYDVLRVMDSHHVSQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVHNDNAVANAG 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01991 691 MobiDBLite consensus disorder prediction 520 537 - -
Bva08g01991 691 MobiDBLite consensus disorder prediction 196 219 - -
Bva08g01991 691 ProSiteProfiles Response regulatory domain profile. 48 166 IPR001789 GO:0000160
Bva08g01991 691 PANTHER PRR RESPONSE REGULATOR 35 246 - -
Bva08g01991 691 SMART REC_2 47 162 IPR001789 GO:0000160
Bva08g01991 691 SUPERFAMILY CheY-like 47 173 IPR011006 -
Bva08g01991 691 PANTHER PRR RESPONSE REGULATOR 253 679 - -
Bva08g01991 691 CDD psREC_PRR 49 152 - -
Bva08g01991 691 PANTHER TWO-COMPONENT RESPONSE REGULATOR 253 679 IPR045279 GO:0009736
Bva08g01991 691 Pfam Response regulator receiver domain 49 160 IPR001789 GO:0000160
Bva08g01991 691 MobiDBLite consensus disorder prediction 519 542 - -
Bva08g01991 691 Gene3D - 45 271 - -
Bva08g01991 691 Pfam CCT motif 638 680 IPR010402 GO:0005515
Bva08g01991 691 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 246 IPR045279 GO:0009736
Bva08g01991 691 ProSiteProfiles CCT domain profile. 638 680 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01991 Bva-Chr8 13348268 13353142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01991 337 686 Response Regulator Gene Family AT5G24470 30.137 7.21e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bva08g01991 Response_reg 5.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01991 K12130 - gmx:100779346 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01991 08 13348268 13353142 Bva08g01991 08 13348268 13353142 ECH
Bva02g02116 02 21770073 21775255 Bva08g01991 08 13348268 13353142 ECH