Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01985 ATGCCCCGCCGTCCAAGGAAAACTGCTTTCTTGCCAGGCCTAGGCCTGGACACTAAGTTATGGTCCATTCAAGGCCTTAATATGGGCCGAAGAGTTAAAGATCTCCAATCCATTTCGGCCCATCCTATCGTTCAATCCTTTAAAAGCCATTTCGCAGAATCCCTCAAAACCCTAGTGTCTCATTGCTGCTGCGCATCCACTGCAGAGAGGAAGCCAGTCATCTCGGATCTCAGTGCTGTGAGCATAAAAATGTCGCTTGGGGAGCTTGCTGCCGGCTACGCTGTTTTGATCCTTCACGATGACAACATTCCTGTCACTGCCGAGAAGATCACAACCTTGGTGAAAGCGGCAAAGATTGACATTGAATCTTATTGGGCGATGTTATTTGCTAAGCTTGCTGAGAAGAAAAACATTGAAGATCTCATCCTAAAtgctggtggtggtggtgctcCAGTTGCTGTGGCTGCTCCAGTTGCTGCTGGtggtgctgctgctgctgcccCTGCTGCTCCTGCAGctgaggagaagaagaagGAAGAACCCCAGGAAGAGAGTGATGATGACATGGGATTCAGCTTGTTCGATTA 587 0.4361 MPRRPRKTAFLPGLGLDTKLWSIQGLNMGRRVKDLQSISAHPIVQSFKSHFAESLKTLVSHCCCASTAERKPVISDLSAVSIKMSLGELAAGYAVLILHDDNIPVTAEKITTLVKAAKIDIESYWAMLFAKLAEKKNIEDLILNAGGGGAPVAVAAPVAAGGAAAAAPAAPAAEEKKKEEPQEESDDDMGFSLFD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01985 195 Gene3D - 84 146 IPR038716 -
Bva08g01985 195 CDD Ribosomal_P1 88 144 - -
Bva08g01985 195 MobiDBLite consensus disorder prediction 168 195 - -
Bva08g01985 195 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 84 195 - -
Bva08g01985 195 Pfam 60s Acidic ribosomal protein 105 194 - -
Bva08g01985 195 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 84 195 - -
Bva08g01985 195 Hamap 50S ribosomal protein L12 [rpl12]. 89 195 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01985 Bva-Chr8 13321001 13322398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01985 84 195 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 55.263 3.47e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01985 K02942 - zju:107423779 125.561