Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01982 ATGCCAGAAAGCATGAGTATATCGGTGAATGGACAATCTCAAGTTCCTCCTGGTTTTCGGTTTCATCCAACAGAAGAAGAGCTGTTGCAGTACTACTTGAGGAAGAAGGTTTCCTATGAGAAGATTGACCTTGATGTTATTCGAGATGTTGATCTAAACAAGCTTGAGCCTTGGGATATACAAGAGAAGTGCAAAATAGGAACCACCCCTCAACAAGACTGGTATTTCTTCAGCCACAAAGACAAGAAGTATCCCACCGGAACGCGGACCAACCGCGCCACGGCTGCTGGGTTTTGGAAGGCCACTGGCCGTGATAAGGTGATATATAGTAATGGAAAGAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGCCGAGCACCGCACGGCCAAAAGTCCGATTGGATCATGCATGAATATAGACTAGATGACAACACCACCGATTCCACCATTGTTTCAAATGTTATGGGAGATGGATCCCAGGAGGAAGGATGGGTGGTATGCAGGATATTCAAGAAGAAGAACCACCTCAAAACCCTAGACAGCCCTCTAGCCTCTTCAGCAGCAACCCACATGTTTGATTCCGTAGACGAGGGAGCTCTGGAGCAGATACTTCAGCAAATGGGTAGAAGTTGCAAGGAAGAGAACGAAGGCAACAGCAACGACAATGGAAGATTTGCCAAACCAAGAGCCTTTGACTCAGTTGCTATCAAGAGCAACAATGGCTACCTTGACAGGTTCATGAAGCTTCCAAGCCTAGAGAGCCCAAAATCCACAAGCTTAGAGAATGGAGCTGGAGGAGGGTACCAACCCATTATACCAGATATGGTCACGGTCACAGACAACGAAGGGTCATTCTCAACGCACCAGGAGAGTGGTGGTGACCCAAACAACAtgcttcatcatcatcaaatgGAGTCGTCCTCATCAAATGGCCTCACCAACTGGGCAGCCCTGGATCGGCTGGTAGCTTCTCAGCTGAACGGCCAAACAGAGGCTTCTAGGCAATTAGCTTGCTTCAATGACCCCACTTTGGGTTATTGCACTAACACTGACCATGATCTGCAGCCATTGCCTACCCTACGatcatcatcattttcatcaataatatcatcatcatcacacACCAGGTCTGCTTACAGTGTTGCTCCCACACTGGATAATTCCAGCGAGATTGACCTATGGAACTTTGCAAGAGCAACATCATCGCTATTGTCATCCTCAGAACCACTTTGCCACGTGTCCAACACGTCAGTGTA 1262 0.4556 MPESMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQQDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTDSTIVSNVMGDGSQEEGWVVCRIFKKKNHLKTLDSPLASSAATHMFDSVDEGALEQILQQMGRSCKEENEGNSNDNGRFAKPRAFDSVAIKSNNGYLDRFMKLPSLESPKSTSLENGAGGGYQPIIPDMVTVTDNEGSFSTHQESGGDPNNMLHHHQMESSSSNGLTNWAALDRLVASQLNGQTEASRQLACFNDPTLGYCTNTDHDLQPLPTLRSSSFSSIISSSSHTRSAYSVAPTLDNSSEIDLWNFARATSSLLSSSEPLCHVSNTSV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01982 420 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Bva08g01982 420 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 357 - -
Bva08g01982 420 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Bva08g01982 420 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Bva08g01982 420 SUPERFAMILY NAC domain 10 174 IPR036093 GO:0003677|GO:0006355
Bva08g01982 420 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 9 357 - -
Bva08g01982 420 MobiDBLite consensus disorder prediction 283 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01982 Bva-Chr8 13294286 13296246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01982 1 419 NAC Transcription Factor Family AT2G46770 53.935 7.06e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g01982 NAM 5.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01982 - - gmx:100793308 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01982 08 13294286 13296246 Bva08g01982 08 13294286 13296246 ECH