Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01981 ATGGGGAAGAAGGGAGGTAGCTCATGGTTCACTGCTGTGAAAAGGGCATTCAGATCTCCAACAAAAGACAGTGACAACAGGAGTagcagaagaagagaagaccATGACCAAGAAGAAGACGAAGAGAAGaagagagaaaaacgAAGATGGCTTTTCAGAAAACCTTTAAATCAGGAAAATGGACAAACCCCACCAAAGGGGAAGCCTGATGTGTCTGCAACTGCAAGTGGGACTTCAACCAGTGACCATGTATCTGTGACGGCAGTGAAGGCCGCCACCACAGATCAAAAACATGCACTCGCAGTGGCGGTGGCAACCGCCGAGGCCGCCATGGCCACCGCCCAGGCTGCTGTGGAAGTAGTCAGAATGAACAGACCAAATAATCATGCTAGGGAGCTCCACTATGCAGCTGTTGTAATTCAAACTGCATTTCGAGGATATCTGGCAAGGAGAGCTCTTCGTGCACTGAAGGGGCTAGTGAAGCTCCAAGCTTTGGTGAGAGGGCATAATGTTAGGAAGCAAGCAAAGATGACCCTCCGGTGCATGCAAGCTCTGGTTAGAGTACAGGCTAGAGTGCTCGACCAGCGCATGAGGTTGTCACATGATGGTAGCAGAAAATCCACTTTCAGTGATACCAACAGTGTTTGGGAATCCCGGTATCTTCACGACATCTCAGATAGAAAATCAGTGTCAAGAGAGGGAAGCAGCATTGCAGATGATTGGGATGAAAGACCACACACTGTTGAAGAAGTTAAAGCCATGTTACAGAAGAGGAAAGAAGCAGCAATGAAGCGAGACAGGTCCTTGTCTCAAGCCTTCTCCCAAGAGAGTTGGAGGAGAGGAAGAAGCCCATCGATTGGAAATGACGAGGAGCTtcaggagagaccaaaatggcttGATCGGTGGATGCCAGCGAAGCCATGGGAAACCAGAGGAAGAGCTTCAACTGATCAAAGAGAGTCCATTAAAACAGTGGAAATGGATACCTCTCAGCCTTATTCATATCTAGGATCAAATTACAGAAGATCACAtccaaattatcaatataaccCGCACCAATACCAACACCAAGCACAACCACAAAGACATTCAGTTGCTTCCCCATTACACAGAACCCACCAAAACGGAGGATCTCTTCACCAATCCCCTGCAACTGCAACCCCTTCCCCTGCAAAATCAAGGCCTATCCAAGTCAGGTCTGCAAGCCCTCGCTGCGGTAGAGAAGATAGAACCTTCCATAGTACCTCTCAAACACCAAGCTTAAGGTCCAATTACCATTACACAGGGAACTTATATCAAAACGGTAGTTCAAGGGTTGGAACAAGTAACAATGGTGCTACATTGCCTAACTACATGGCGGCAACGGAATCAGCAAAGGCGCGAATCCGGTCTCAGAGTGCGCCGAGGCAGAGGCCATCCACGCCGGAGAGGGACAGAGTAGGGTCAGCAAAGAAGAGGCTTTCTTTCCCAGTTCCTGACCCTTACGGTGCAGGAATGGGTTACTCAAGTTATAGTCATAATCTAAGGAGTCCAAGCTTTAAGAGTGTGAGTGCATCACATTTTGGGTTGGAGCAGCAATCAAACTATTCCTCTTGCTGCACTGAGAGTCTTGGTGGTGGTGAGATTTCCCCTTCCTCAACAAGTGACCTTAGAAGGTGGTTGAGATG 1667 0.4637 MGKKGGSSWFTAVKRAFRSPTKDSDNRSSRRREDHDQEEDEEKKREKRRWLFRKPLNQENGQTPPKGKPDVSATASGTSTSDHVSVTAVKAATTDQKHALAVAVATAEAAMATAQAAVEVVRMNRPNNHARELHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHDGSRKSTFSDTNSVWESRYLHDISDRKSVSREGSSIADDWDERPHTVEEVKAMLQKRKEAAMKRDRSLSQAFSQESWRRGRSPSIGNDEELQERPKWLDRWMPAKPWETRGRASTDQRESIKTVEMDTSQPYSYLGSNYRRSHPNYQYNPHQYQHQAQPQRHSVASPLHRTHQNGGSLHQSPATATPSPAKSRPIQVRSASPRCGREDRTFHSTSQTPSLRSNYHYTGNLYQNGSSRVGTSNNGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPVPDPYGAGMGYSSYSHNLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGGEISPSSTSDLRRWLR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01981 555 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Bva08g01981 555 MobiDBLite consensus disorder prediction 412 429 - -
Bva08g01981 555 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Bva08g01981 555 MobiDBLite consensus disorder prediction 456 491 - -
Bva08g01981 555 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 555 - -
Bva08g01981 555 PANTHER IQ-DOMAIN 5-RELATED 1 555 - -
Bva08g01981 555 SMART iq_5 155 176 IPR000048 GO:0005515
Bva08g01981 555 SMART iq_5 132 154 IPR000048 GO:0005515
Bva08g01981 555 MobiDBLite consensus disorder prediction 259 295 - -
Bva08g01981 555 Pfam IQ calmodulin-binding motif 136 154 IPR000048 GO:0005515
Bva08g01981 555 Pfam IQ calmodulin-binding motif 160 176 IPR000048 GO:0005515
Bva08g01981 555 MobiDBLite consensus disorder prediction 1 83 - -
Bva08g01981 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 177 IPR027417 -
Bva08g01981 555 MobiDBLite consensus disorder prediction 309 324 - -
Bva08g01981 555 MobiDBLite consensus disorder prediction 56 83 - -
Bva08g01981 555 MobiDBLite consensus disorder prediction 268 282 - -
Bva08g01981 555 MobiDBLite consensus disorder prediction 533 555 - -
Bva08g01981 555 Gene3D - 130 185 - -
Bva08g01981 555 Pfam Protein of unknown function (DUF4005) 402 506 IPR025064 -
Bva08g01981 555 MobiDBLite consensus disorder prediction 309 429 - -
Bva08g01981 555 MobiDBLite consensus disorder prediction 325 396 - -
Bva08g01981 555 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01981 Bva-Chr8 13277700 13280726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01981 1 555 IQD Protein Family AT1G01110 57.931 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01981 - - gmx:100786729 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01981 08 13277700 13280726 Bva12g01892 12 15200080 15202067 ECH
Bva08g01981 08 13277700 13280726 Bva08g01981 08 13277700 13280726 ECH
Bva02g02105 02 21692113 21694781 Bva08g01981 08 13277700 13280726 ECH