Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01975 ATGAGTAAGCGGCTCCCCTCGACCCGGATCCGTGTAGGGAAATACGAGCTGGGtaaaaccattggagaaggtAGCTTCGCGAAAGTTAAGTTTGCAAGGAACGTCGACACCGGAGAGAGCGTCGCCATCAAAATCCTCGATCGTAACATGGTTCTGCGCCACAAGATGGTGGAACAGTTGAAGAGGGAAATATCGATCATGAAGCTGATCAAACATCCGAATGTTGTCAAAATATTTGAGGTGATGGCAAGCAAAACGAAGATTTACATTGTCCTGGAGTATGTTGGAGGGGGAGAACTATTTGACAAAATAGCTACAAATGGGAAGCTTAAGGAAGACGAAGCAAGGAGATATTTCCAACAACTAATTAACGCTGTAGATTACTGCCATAGTAGAGGCGTGTATCACAGAGATCTGAAGCCAGAGAATCTTCTTCTGGATTCACACGGTGTTCTTAAAGTTTCAGATTTTGGATTATGTACATTCTCAGAGCAGAAGGATGGACTACTCCGCACTGCTTGCGGAACCCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAAAGGCTATGATGGATCATCAGCTGATATCTGGTCTTGTGGGGTTATTCTCTTTGTACTTATGGCTGGGTACTTGCCTTTTGATGAGCCAAATTGTATGGCTTTGTATAAGAAAATCAGTACGGCTGATTTCACCTTTCCATCGTGGTTTTCATCTGAATCAAAGAAACTACTGAAACGTATTCTTGAGCCAAACCCTCTCAAAAGGATAAAAGTTcctgaaattttaaaagatgaaTGGTTCAAGAAGGGATACAAGCCAGCAACTTTTAAAGAGGAAGAGGGTGTAAATATTGATGATGTCGACGCTGCATTTGGTGATTCTAAGGAAGAGCTCGTGacagaaagaaaagtgaaacCCGTCTCAGTGAATGCTTTTGAGTTCATCTCTAGGTCACAAAGTTTCAATCTTGATAGTTTGTTTGAGAAGGAGACGCAAGGTTTGGTGAAGCGAGAAACTTGTTTTACTTCACAGCGGCCAGCAAATGAAATCATGTCTAAAATTGAGGAAGCTGCCAGGCCCCTGGGTTTCAATGTCCACAAGCGAGACTACAAGATGAAGCTTCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCTGTGGCTACAGAGGTTTTCGAAGTGGCTCCTTCTTTGCACATTGTGGAGCTGCGAAAAACAGGGGGTGACACACTGGAATTTCACAGGGCATTTCTACAAAAACTTTTCATCAGGGTTGCAAGACATCGTGTGGCATACCAAGGAAACGAAGTGAAGAAGAATAAAGGTGTTAGTGCTGATTGCTCGGCATTTTTGTCTTTGGGTTCATG 1370 0.4182 MSKRLPSTRIRVGKYELGKTIGEGSFAKVKFARNVDTGESVAIKILDRNMVLRHKMVEQLKREISIMKLIKHPNVVKIFEVMASKTKIYIVLEYVGGGELFDKIATNGKLKEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSHGVLKVSDFGLCTFSEQKDGLLRTACGTPNYVAPEVLNDKGYDGSSADIWSCGVILFVLMAGYLPFDEPNCMALYKKISTADFTFPSWFSSESKKLLKRILEPNPLKRIKVPEILKDEWFKKGYKPATFKEEEGVNIDDVDAAFGDSKEELVTERKVKPVSVNAFEFISRSQSFNLDSLFEKETQGLVKRETCFTSQRPANEIMSKIEEAARPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHIVELRKTGGDTLEFHRAFLQKLFIRVARHRVAYQGNEVKKNKGVSADCSAFLSLGS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01975 456 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bva08g01975 456 SUPERFAMILY Protein kinase-like (PK-like) 11 282 IPR011009 -
Bva08g01975 456 PANTHER - 8 418 - -
Bva08g01975 456 Gene3D Kinase associated domain 1, KA1 305 426 - -
Bva08g01975 456 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Bva08g01975 456 CDD CIPK_C 311 422 - -
Bva08g01975 456 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01975 456 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 418 - -
Bva08g01975 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bva08g01975 456 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01975 456 Pfam NAF domain 307 368 IPR004041 GO:0007165
Bva08g01975 456 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01975 456 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bva08g01975 456 Gene3D Transferase(Phosphotransferase) domain 1 95 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01975 Bva-Chr8 13248864 13253385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01975 3 416 CBL-interacting serine-threonine protein kinases AT1G01140 75.060 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva08g01975 Pkinase 2.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01975 - - lja:Lj3g3v2483040.1 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01975 08 13248864 13253385 Bva08g01975 08 13248864 13253385 ECH