Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01968 ATGGGCCAGTGCTACGGCAAGACCAATCCATCAGCGGAAAATGATGCTGCTCCAAACATCACCACTGTTGTTGTTGAGTCCGCTGACCGGCCGCAGTCGCCGCTACCGTCTTCCGGTGGTGGCGGTAACGGATTCCCGTGGGTGAAGAATACTCCAGCTCGGTCGTCGAACGCGAGCCAATGGCCTAGTCCCTATCCGCACGGTGTCAACGCCAGTCCGCTGCCAGCTGGAGTATCGCCGTCACCAGCTAGGACGTCGACGCCGATGAGGTTCTTCCGGAAGCCTTTCCCGCCGCCTTCGCCGGCGAAGCATATCAGAGCTTCGCTGGCTAAGCGTCTCGGTCACGGGAAGCCCAAGGAGGTGCCGATTCCGGAGGACCGTGGGACTGAGCCGGAGCAGTTGCTGGACAAGAGCTTTGGATATAGTAAGAATTTTGGAGCTAAGTACGAGTTGGGGAAGGAAGTGGGTAAAGGGCATTTCGGTCATACGTGCTCTGCAAGGGGCAAAAAGGGCGAGCTCAAAGATCAGCCTCTAGCAGTTAAGATAATTTCGAAAGCAAAGATGACAACAGCAATAGCTATTGAAGATGTTCGTAGAGAGGTGAAGATATTAAAATCTCTATCTGGCCATCATCATCTCGTCAAATTTCACGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAatTGTGTGAAGGTGGGGAGCTTCTTGACAGGATTTTGTCAAGGGGTGGAAGGTATACAGAGGAGGATGCAAAGATTATAGTGTTGCAGATTCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGCGTTGTGCACCGGGACCTGAAACCTGAGAATTTCCTTTTCACTTCAAGGAGTGAAGATGCTGACATGAGGCTTATTGATTTTGGTTTATCTGACTTCATCAGACCAGAAGAGAGACTCAACGATATTGTTGGGAGTGCATACTATGTTGCACCTGAGGTCCTTCACAGATCATATAGTTTCGAAGCAGATATATGGAGTATTGGCGTTATCACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAGTCCGGAATTTTTCATGCAGTGCTCAGAGCTGATCctaactttgatgatttacCCTGGCCTTCTGTGTCTGCTGAGGCAAAGGACTTTGTGAAAAGGCTCTTAAACAAGGATTATAGGAAGAGAATGACAGCCGTCCAAGCCCTAACTCACCCATGGTTGAGGGATGACAACCGTCCTATCCCTTTAGACATATTGATCTATAAATTGGTGAAGTCCTACCTCCATGCATCACCATTCAAACGTGCAGCACTAAAGGCCCTTTCAAAAGCCTTGACAGAGGATGAGTTGGTTTATCTTAGAGCTCAGTTCAGATTGTTGGAACCAAATAAAGACGGACACATCTCCCTTGACAATTTCAAAATGGCTCTTGTACGTAACTCAACTGATGCCATGATGGAATCAAGGGTTCTTGATATCATTCATGCGatgGAACCACTTGCCCATAGAAAAATGgactttgaagaatttagtGCAGCTGCTATAAGCACATACCAATTGGAGGCTCTTGATAGGTGGGAGGACGCGGCCTCCACTGGTTTTGAGTATTTTGAAAGAGATGGAAACCGTGTAATATCAGTTGAAGAATTAGCAAGAGAGCTGAATCTTGGTCCTTCAGCATATTCAGTTCTCAGAGACTGGATACGAAACACAGACGGAAAGCTTAGTTTTAatggatataaaaaattcttgcatGGCGTCACTCTCCGTAGTCCCAACACAAGATATCATTA 1805 0.4576 MGQCYGKTNPSAENDAAPNITTVVVESADRPQSPLPSSGGGGNGFPWVKNTPARSSNASQWPSPYPHGVNASPLPAGVSPSPARTSTPMRFFRKPFPPPSPAKHIRASLAKRLGHGKPKEVPIPEDRGTEPEQLLDKSFGYSKNFGAKYELGKEVGKGHFGHTCSARGKKGELKDQPLAVKIISKAKMTTAIAIEDVRREVKILKSLSGHHHLVKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKIIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMRLIDFGLSDFIRPEERLNDIVGSAYYVAPEVLHRSYSFEADIWSIGVITYILLCGSRPFWARTESGIFHAVLRADPNFDDLPWPSVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILIYKLVKSYLHASPFKRAALKALSKALTEDELVYLRAQFRLLEPNKDGHISLDNFKMALVRNSTDAMMESRVLDIIHAMEPLAHRKMDFEEFSAAAISTYQLEALDRWEDAASTGFEYFERDGNRVISVEELARELNLGPSAYSVLRDWIRNTDGKLSFNGYKKFLHGVTLRSPNTRYH 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01968 601 SUPERFAMILY Protein kinase-like (PK-like) 148 434 IPR011009 -
Bva08g01968 601 Pfam Protein kinase domain 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01968 601 CDD STKc_CAMK 148 410 - -
Bva08g01968 601 MobiDBLite consensus disorder prediction 110 131 - -
Bva08g01968 601 MobiDBLite consensus disorder prediction 1 85 - -
Bva08g01968 601 SMART serkin_6 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01968 601 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Bva08g01968 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Bva08g01968 601 Gene3D Transferase(Phosphotransferase) domain 1 238 419 - -
Bva08g01968 601 ProSiteProfiles Protein kinase domain profile. 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01968 601 SUPERFAMILY EF-hand 441 589 IPR011992 -
Bva08g01968 601 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Bva08g01968 601 MobiDBLite consensus disorder prediction 49 66 - -
Bva08g01968 601 PANTHER CDPK-RELATED KINASE 3 53 594 - -
Bva08g01968 601 ProSitePatterns Protein kinases ATP-binding region signature. 155 181 IPR017441 GO:0005524
Bva08g01968 601 PANTHER SERINE/THREONINE-PROTEIN KINASE 53 594 - -
Bva08g01968 601 MobiDBLite consensus disorder prediction 113 131 - -
Bva08g01968 601 Gene3D - 420 591 - -
Bva08g01968 601 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01968 Bva-Chr8 13208678 13213746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01968 1 595 EF-hand Containing Proteins AT3G50530 58.100 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva08g01968 Pkinase 9.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01968 - - qsu:111993273 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01968 08 13208678 13213746 Bva08g01968 08 13208678 13213746 ECH
Bva02g02094 02 21623788 21631117 Bva08g01968 08 13208678 13213746 ECH