Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01967 ATGGGTACTGGAGAAAAGAGTCTCAAGAGCTTTCATGTGCATCGCTCCCATCTTGTTCATCACCATAGCAGCAGCCACGGCAAGAAAAATGAGTTCAGAGATGTTCCAAAAGGGTGTCTTGCAATCAAGGTTGGCCAGGGAGAAGAGCAGCAGAGATTTGTGGTTCCTGTGATTTACTTCAATCATCCTCTGTTCATGCAGCTGCTGAAGGAGGCAGAGGAGGAATACGGGTTTGATCAGAAGGGAACCATAACCATTCCCTGCCACGTGGAAGAGTTTAGAAACGTCCAAGGCATGATTGATAGGGATAAGTCCCTCCATCATCACCATCATATGGGTTGCTTTGGCTTCTG 353 0.4731 MGTGEKSLKSFHVHRSHLVHHHSSSHGKKNEFRDVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVQGMIDRDKSLHHHHHMGCFGF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01967 117 PANTHER SMALL AUXIN-UP RNA-RELATED 28 111 - -
Bva08g01967 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 111 IPR003676 GO:0009733
Bva08g01967 117 Pfam Auxin responsive protein 25 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01967 Bva-Chr8 13205397 13206201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01967 34 113 Calmodulin-binding Proteins AT5G20810 48.148 1.88e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01967 K14488 - pvy:116108881 191.43