Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01966 ATGTTTGGCGGCGGAGAAAAGAGTTCTGAGGAATTTTGCGCTTCATATCACCACCTGCATGATCAGGGAAAGGAAGTGATTACCAAGAAATTGCCAAAAGGCTTTTTGGCAATCAAGGTGGGTCAAGGTGAAGAGCAACAGAGAATTGTGGTGCCTGTGTTATATCTCAACCATCCCCTATTTGCCCAACTGCTGAAGGAGGCTGAGGAAGAGTATGGTTTTGAATATCACGAGGGTGCCATAACCATACCTTgtcatgtggaggagtttagGTACATTCAAGGCACCATTGAAAGAGAGAAGTCCctgcaccaccaccaccatctTGGCTGCTTTAGGGCTTCTACCAGGGAGACGAAACCAGTCAAACTGTCAAAGTGCGCACAAGCTta 392 0.4158 MFGGGEKSSEEFCASYHHLHDQGKEVITKKLPKGFLAIKVGQGEEQQRIVVPVLYLNHPLFAQLLKEAEEEYGFEYHEGAITIPCHVEEFRYIQGTIEREKSLHHHHHLGCFRASTRETKPVKLSKCAQA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01966 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 20 109 - -
Bva08g01966 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 109 IPR003676 GO:0009733
Bva08g01966 130 Pfam Auxin responsive protein 27 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01966 Bva-Chr8 13200346 13201119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01966 8 110 Calmodulin-binding Proteins AT5G20810 43.269 6.95e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01966 K14488 - cit:102614790 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01966 08 13200346 13201119 Bva08g01966 08 13200346 13201119 ECH
Bva02g02093 02 21620769 21621705 Bva08g01966 08 13200346 13201119 ECH