Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01952 ATGAGTTCTGGTTCTGAACTGCTACTTCCTTCAAATAACGGATTTAGGACAAGGGAGCCTCCCGAGAATGAGGAGGACTGCGTAGAAAAAGATCCAAGTGGCCGATATCTTCGGTACGATGAAATCTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGAGCATTTGACGCAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTCAGAATTGATGAGCTCTTTCAATCAGCAGAAGATCTAGAAAAATTGTATTCTGAAGTTCATTTATTGAAGACTTTGAAGCATGAAAATATCATCAAGTTCTTTAATTCATGGATTGATGATAAACAGAAAACTGTTAACATGATTACTGAGCTCTTCGTATCTGGAAGTTTAAGGCAATACCGTAAGAAGCATAAGAATGTTGACATGAAGGCCATAAAAAATTGGGCTAGGCAGATTCTTCGAGGTTTAGTCTATCTTCACAGTCATAAGCCAGCTATTATTCATAGAGACTTGAAGTGTGATAACATCTTTGTGAATGGAAACCATGGGGAAGTCAAAATAGGTGACCTTGGTTTGGCAACTGTTATGCAACAACCAACTGCTCGAAGTGTCATTGggACTCCTGAGTTTATGGCTCCAGAGTTATATGAAGAGGAATACAATGAACTTGttgatatatattcttttggcATGTGTATATTGGAAATGGTTACTTTTGAGTATCCATACAGTGAATGCAAAAACCCAGCTCAAATCTTCAAGAAAGTTACCTCTGGCATCAAGCCTGCTTCCCTTAGCAGGGTGAATGATCCGCAAATTAAGGATTTTATTGAGAAATGTCTAGTTCCAGCATCTGACAGATTGTCAGCAGAAGAGCTTCTCAAAGACCCATTTCTGCAAGTTGAGTGTCCAAAGGATTCAATCTGTGATACCTTACAGTTGCCTATTCAAACTCCAAAAGCTATAGATCTTAATATGTCTGGTCCTCTATCTATGGATATAGATGCTGACTACAAACAGAATTCTATAAGTACTTGTACTGAAAGCAACAACGGAAGTCCACATTCTCCAGTTCTAGAATTCCAGAGGACAAACAAGAACAATGAGTTTAGGTTGAAAGGGATGAAAAATGATGACAACACAGTAGCACTGACCTTGCGTATTGCTGATTCATGTGCAGGTCGAGTGAGGAACatacattttctcttttatcttgATACAGATACTGCAGTTTCTGTGGCTGCAGAGATGGTTGAACAGTTGGAGTTAGGAGACCATGATGTGGCCTTGATTGCTGAACTCATCGATTACCTGATTATAAAACTTCTACCTGGCTGGAAACCCTCATCTGATTGGTCCCCAAGTGGTGAATTAAATCTCCATGGTGGGTTTCCTATGCTTGGAAATGGCCAAATCTCAATGGAGAGCCCGTGGGATACTGTCCTAACTAGTGTTCCTGCTGGTTTGGTCATTGAGCAAGATATTTTCTCTGGGATAAATACTATTCCTCAAGAAGGTTTTGTGACAGCTGAGGAGAGCTGCTTGAGTAATGATGCTGACAATCATTCTTTTCAGGGAGACTATAATTCTTCTCCTAGTTTGGCTCACTTGGACGATGAACATTCACAAGGATCTGTGGTTTCTGAGCTAGTTGAAGATGCATTCATAAAACACGAGAACCCTCTTGATCCGGATATTGATGGGAGCACTAAAAGCTTAAGTAGGTCCATCTCTGAACTGGATATTGGGGAGACTTATTTTGATGACTACAAATTCGCAAAGAACTCAGGCCCagcatttttaaaaacatctAATGTTATGAGCTTGACTAGCAGTTGTTCTTCTGCGTCTATGGCAAGCAAAGATATTGATTTTGAGCTAAAATTGGAACTTGATGCAATTGAGGAACAATACCAACATTGGTTTCAAGAACTTGCTAGAATGAGATTGGAGGCGTTGGAAGCCGCCAGAAGGAGATGGGAAGCCCGGAAGAAACAGgctattcatta 1994 0.3927 MSSGSELLLPSNNGFRTREPPENEEDCVEKDPSGRYLRYDEILGKGAFKTVYRAFDAVDGIEVAWNQVRIDELFQSAEDLEKLYSEVHLLKTLKHENIIKFFNSWIDDKQKTVNMITELFVSGSLRQYRKKHKNVDMKAIKNWARQILRGLVYLHSHKPAIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLSRVNDPQIKDFIEKCLVPASDRLSAEELLKDPFLQVECPKDSICDTLQLPIQTPKAIDLNMSGPLSMDIDADYKQNSISTCTESNNGSPHSPVLEFQRTNKNNEFRLKGMKNDDNTVALTLRIADSCAGRVRNIHFLFYLDTDTAVSVAAEMVEQLELGDHDVALIAELIDYLIIKLLPGWKPSSDWSPSGELNLHGGFPMLGNGQISMESPWDTVLTSVPAGLVIEQDIFSGINTIPQEGFVTAEESCLSNDADNHSFQGDYNSSPSLAHLDDEHSQGSVVSELVEDAFIKHENPLDPDIDGSTKSLSRSISELDIGETYFDDYKFAKNSGPAFLKTSNVMSLTSSCSSASMASKDIDFELKLELDAIEEQYQHWFQELARMRLEALEAARRRWEARKKQAIH 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01952 664 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01952 664 Coils Coil 626 664 - -
Bva08g01952 664 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Bva08g01952 664 MobiDBLite consensus disorder prediction 1 30 - -
Bva08g01952 664 CDD STKc_WNK 35 294 - -
Bva08g01952 664 SUPERFAMILY Protein kinase-like (PK-like) 34 322 IPR011009 -
Bva08g01952 664 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01952 664 PANTHER KINASE DOMAIN PROTEIN 1 664 - -
Bva08g01952 664 Gene3D - 375 442 - -
Bva08g01952 664 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01952 664 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 664 - -
Bva08g01952 664 Gene3D Transferase(Phosphotransferase) domain 1 120 299 - -
Bva08g01952 664 Gene3D Phosphorylase Kinase; domain 1 21 118 - -
Bva08g01952 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01952 Bva-Chr8 13095027 13099332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01952 510 664 MAP Kinase Kinase Kinase AT5G41990 28.485 9.33e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva08g01952 Pkinase 3.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01952 K08867 - jre:108986606 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01952 08 13095027 13099332 Bva08g01952 08 13095027 13099332 ECH