Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01914 ATGGGGTACATAGAACAAAGTTTGGCAGCTTCGAACATGGAAGCAATCCCAGAAGCAAAATTGAATGAGAATGGAGAGCCAATTCTTTATGCTTATTCTTCTTGGCTTAAAGAGCACCCGTCTGCCTTGGAACACTTTGAGGAAATGATGAACACTGCTGAAGGGAAAGAGATTGTGGTGTTTCTGGACTATGACGGAACACTCTCACCGATTGTAGATGACCCTGACCAAGCCCACATGAGTGATGCTATGCGCGAAGCAGTACGTAAAATTGCTCACTATTTTCAAACTGCCATTATTAGTGGAAGGAGTCGCAACAAGGTGTTTCATTTTGTTAAGCTGGAGAATGTCTATTATGCTGGAAGTCATGGGATGGATATATGTACCCCATTAGGCTCTTCAAGATATGGAGACAACAAAAACCAGACAAAGATCACTGATGAAAAGGGCAATGAACTAATTCACTTTCATCCTGCACGTGGATATTCGCATGAGATCAACAAGATACTAGAggatttgaaaagaaaaaccaaaagcaTAAAGGGCTCCATGGTAGAAGATAATAATTTCTGTATCAGTGTGCACTACCGGCGTGTGAAGAATGAAAAGGATGTTGGCATCCTCAAACAGATGGTGCAGTCCACTATGAAAGCTTACCCTGATTTTATCATATCAGGAGGAAAAAAGGTTATGGAGATACGCCCCAATGTTAAGTGGAATAAAGGTCATGCTTTGAAGTATTTGCTTGACGCTCTTACCTCTGGCAGCAATGAAAATGTTCTGCCTGTGTACATTGGGGATGACAGAACTGATGAAGATGCTTTTAAGGCTATAGGAGAAATTGGACAAGGTTTTCCTATCATTGTTTCTTCAACTGTTAAGGAGACCAAAGCTTCATATTCTCTGAGAGACCCAACTGAAGTGATGTCCTTCTTGCATCTACTGGCAAAGTGGAAGAAGAGCTTGCAAGGGAAAGCTAACAAGTA 986 0.4057 MGYIEQSLAASNMEAIPEAKLNENGEPILYAYSSWLKEHPSALEHFEEMMNTAEGKEIVVFLDYDGTLSPIVDDPDQAHMSDAMREAVRKIAHYFQTAIISGRSRNKVFHFVKLENVYYAGSHGMDICTPLGSSRYGDNKNQTKITDEKGNELIHFHPARGYSHEINKILEDLKRKTKSIKGSMVEDNNFCISVHYRRVKNEKDVGILKQMVQSTMKAYPDFIISGGKKVMEIRPNVKWNKGHALKYLLDALTSGSNENVLPVYIGDDRTDEDAFKAIGEIGQGFPIIVSSTVKETKASYSLRDPTEVMSFLHLLAKWKKSLQGKANK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01914 328 Pfam Trehalose-phosphatase 61 305 IPR003337 GO:0003824|GO:0005992
Bva08g01914 328 Gene3D - 162 328 IPR023214 -
Bva08g01914 328 Gene3D - 58 141 IPR023214 -
Bva08g01914 328 SUPERFAMILY HAD-like 59 319 IPR036412 -
Bva08g01914 328 TIGRFAM T6PP: trehalose-phosphatase 56 317 IPR003337 GO:0003824|GO:0005992
Bva08g01914 328 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 60 281 IPR006379 -
Bva08g01914 328 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 325 IPR044651 GO:0004805|GO:0005992
Bva08g01914 328 CDD HAD_TPP 59 309 - -
Bva08g01914 328 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01914 Bva-Chr8 12860937 12865662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01914 60 327 Trehalose Biosynthesis Gene Families AT1G60140 25.818 3.23e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01914 K01087 - gmx:100799466 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01914 08 12860937 12865662 Bva08g01914 08 12860937 12865662 ECH