Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01907 ATGGGAGAGACCATGAAAATGGAGCAAGTTAGTCTCATCGATGAGCTAACCCAAGGGAAGGAGCTGGCAAAGCAGCTCTGCAGTCatatctcttcttcttctcatgAAACCATTGAATTCCTCATTGGGAAAATACTTTCTTCCTATGAGAAAGCACTGGAGATGCTGAATTGGGAAGCTGGTATGGGGAAGGTTAACCCCACCATAGACACCAAATTGGATTTTCATGGTTCTTTTGCTAATGGGAGTCCCAGAAGTGAAGCTTCAGACCAAGACTTCAAGCACAAAGATGTGTTCAAGAAAAGAAAGACCATGCCAAGATGGACAGAGCAAGTGAAGGTTTGTTCAGGAACTGGGCTTGAAGGGTCTCTAGATGATGGTTATAGCTGGAGGAAATATGGCCAGAAGGATATTCTCGGTTCAAAATATCCAAGAGGATATTACAGATGCACCCATAAAAATCTACGAGGTTGTTTGGCCACAAAACAAGTTCAAAGGTCGGATGAAGACCCAACAATATTTGAAGTAACCTATAGAGGAAGACATACATGCATCCAAGCATCTCATCCAAACAAAGCATTCCCATTAAAAGTAAAGATGGAATTGGTAGAAAATAAAGTTCCTCACCAGCAAGAAAGTCAAGcacaagaagagaaaaaagtacAGCCAACAGAATCAATTTTCTGTTTGGGAGCAGAGCATGGAATCAAGACAGAAGACACAGACACCATTAAAGACATATTTCCATCATTTTGCTTTGCTTCTTCGTCAATAGGTTCTGAACAAGAGGACAACAACATATTCAACGAGACTATGATTGAAAATCATTTCCTGGAAAATTTTTCTCCTGCATTCATTTCAACCTCCACTTCAGAATCAAACATTTTCTGCCAGTTGGGAGGACTAGGCCAAAATGTGCAAACTTCAGAATCTGATACTACAGAGATAATTTCTGCCCCAAATTCAGTCACCAATTCCCCAATTATGGATTTGGATGTGCTGCTTGATGAAGAGGATTTCGACTCATATTTCCCTTTCAAATCCcctgaatttctttctta 1061 0.3855 MGETMKMEQVSLIDELTQGKELAKQLCSHISSSSHETIEFLIGKILSSYEKALEMLNWEAGMGKVNPTIDTKLDFHGSFANGSPRSEASDQDFKHKDVFKKRKTMPRWTEQVKVCSGTGLEGSLDDGYSWRKYGQKDILGSKYPRGYYRCTHKNLRGCLATKQVQRSDEDPTIFEVTYRGRHTCIQASHPNKAFPLKVKMELVENKVPHQQESQAQEEKKVQPTESIFCLGAEHGIKTEDTDTIKDIFPSFCFASSSIGSEQEDNNIFNETMIENHFLENFSPAFISTSTSESNIFCQLGGLGQNVQTSESDTTEIISAPNSVTNSPIMDLDVLLDEEDFDSYFPFKSPEFLS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01907 353 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 345 - -
Bva08g01907 353 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 345 IPR044810 GO:0003700
Bva08g01907 353 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01907 353 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01907 353 SUPERFAMILY WRKY DNA-binding domain 123 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01907 353 Gene3D WRKY domain 112 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01907 353 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01907 Bva-Chr8 12813091 12815407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01907 5 336 WRKY Transcription Factor Family AT2G46400 36.047 3.66e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g01907 WRKY 1.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01907 - - aprc:113849885 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01907 08 12813091 12815407 Bva12g01983 12 15713752 15715770 ECH
Bva08g01907 08 12813091 12815407 Bva08g01907 08 12813091 12815407 ECH
Bva02g02014 02 21166103 21168542 Bva08g01907 08 12813091 12815407 ECH
Bva08g00062 08 338531 340270 Bva08g01907 08 12813091 12815407 ECH
Bva11g02207 11 17936815 17938564 Bva08g01907 08 12813091 12815407 ECH