Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01900 ATGGATCAATTTAGACATATTGGGGAAGCACTGGGAAGTCTGAAGGCTCTGATGGTGTTCAGAGAGAACATTCAAATAAATCACAGGCAATGTTGTTTgctttttgatgttttaagtTTCACATATGATTCAATTGCAGAAGAGATTAGGCAGAATTTGAAATTCGCAGAGCGGCAAGCGAAGTGGAAAGTGCTTGAACAGCCATTGAGAGAGTTGCATAAGATTTTCAAGGAAGGAGAAGCTTACATTAGGCACTGCATGGAAACAAAGGATTGGTTTGCCAAAGCCATTGGCATTTACAATAATACAGATTGCGTTGCGTTTCACATCCACAACTTGCTTTGCTGCCTTCCTATTGTAATTGAAGCAATCGAATCTGCAGGAGAAATATCAGGGCGGGATCAAGATGAGATGCAAAGGAAGAAGGCCATAAATTCTACTAAGTATAGGAAAGAATATAGGGACATGAAGCTTTTCCAGTGGAAATTTGGGAAGCAGTATCTTATTAGCCCAGATTTCTGCCTCCGATATGACACAGCTTGGAAGGAAGATAGATGGattcttttgaataaaattcgTGAAAAGAAACTGTCAGGTTCAGCAAAGTACGATAACAAATTAACAGATTTGCTTATTAAACGTTTAGAAGGATCTGAAGCAGAGGAGGGGAAGCTCCTACCAACATCAATTCTGGTGGGATCCAAGGATTACCAGGTGAGGCGGCGAACGGGGAATGGGAGTCAATGCAAGGAGATTCAATGGTTAGGTGAAAGCTTTCTTATAAGACAGTTTTTTGGGGATATTAAAGCCTTGGAACCAGAGATATCATCACTTTTATCCCTTTCCCACCCAAATATAGTGGAATGCCCTTTTGGTTTTACAGATGATGAGAAGAAAGAGTGCATTTTGCTAATGGAAGTGATGAGCAGAAACCTCTGCACCCACGTCAAAGAATCTTCTGGCACAAAGAAGCGAATTCCATTCACACTTCCTGTGGCGATTGATCTAATGCTTCAAATTGCCAGAGGAATGGAATATCTgcattcaaagaaaatatatcatgGAGAGCTAAATCCTTCAAGCATTCTCGTTAAACCCAGAGGTACATCCACGGAAGGTTACTTGCATGCCAAGATTTCAGAGTTTGGCCTGCATTCTTTAAagaatttggtccaaaaagGAACTTCAAATCAGAATGGAACTGGAACTGGAACCCTCCCATATATCTGGTATGCTCCAGAAGTTCTTGAAGAGCAAGAACAAGAACTAAATGGGGCTACTGAACATTTCAAGTACAAAGAGAAGTCTGATGTTTACAGTTTTGGTATGGTTTGCTTTGAGCTCTTAACAGGTAAAGTCCCTTTTGAAGACAGTCATCTTCAAGGTGACAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCATTCAACACACCGAAGTATGTTATAAACTTGACGAAGAGATGTTGGCATACTGACCCAAATCAACGGCCAAGCTTCTCCTCCATCTGTAGAATACTTCGATATCTAAAGCGATTCCTTGTAATGAACCCTGATTACAACACCCAGCCAGACCCACCAGTGCCATTGGTAGATTACTGTGATATAGAATCAAATCTTTTGAGGAAGTTCCCTTCTTGGGGGAGTTCTGAATCATCATCAATATCCCAAATTCCATTTCAAATGTTTGCCTATCGAGTTATAGAGAATGAAAAGATAAGTTCTAGCTCTAAGGATAACTCTGAAATTGAATCTGGAAGTGATGCTTCAGTCTGTGGTGATGAACTTCTGACCTCTGGGGATGATTCACTTCCATCAACACGGGAGAGGAAGTCTTCTGCTGGATCTGATAGCAACAGCAGGAGGACCTCAACACCCCGGAGATCTTTTGATTTGAGGCCCAGCAAATACCCAGTTACACCAAGAGGTCGATCAGTTAGACCTCCACAAATGACGTGCGCGCGAAGTATGAAGCTAAATTCAGAGAGTCATATGATGATCTCGGGTCCAAGAATTAGAAGAACATCTTCTGACTGCAGTCTTAGGAACAGGGATGTACAGCGAGGAGCTTGGCTGTA 2087 0.4058 MDQFRHIGEALGSLKALMVFRENIQINHRQCCLLFDVLSFTYDSIAEEIRQNLKFAERQAKWKVLEQPLRELHKIFKEGEAYIRHCMETKDWFAKAIGIYNNTDCVAFHIHNLLCCLPIVIEAIESAGEISGRDQDEMQRKKAINSTKYRKEYRDMKLFQWKFGKQYLISPDFCLRYDTAWKEDRWILLNKIREKKLSGSAKYDNKLTDLLIKRLEGSEAEEGKLLPTSILVGSKDYQVRRRTGNGSQCKEIQWLGESFLIRQFFGDIKALEPEISSLLSLSHPNIVECPFGFTDDEKKECILLMEVMSRNLCTHVKESSGTKKRIPFTLPVAIDLMLQIARGMEYLHSKKIYHGELNPSSILVKPRGTSTEGYLHAKISEFGLHSLKNLVQKGTSNQNGTGTGTLPYIWYAPEVLEEQEQELNGATEHFKYKEKSDVYSFGMVCFELLTGKVPFEDSHLQGDKMSRNIRAGERPLFPFNTPKYVINLTKRCWHTDPNQRPSFSSICRILRYLKRFLVMNPDYNTQPDPPVPLVDYCDIESNLLRKFPSWGSSESSSISQIPFQMFAYRVIENEKISSSSKDNSEIESGSDASVCGDELLTSGDDSLPSTRERKSSAGSDSNSRRTSTPRRSFDLRPSKYPVTPRGRSVRPPQMTCARSMKLNSESHMMISGPRIRRTSSDCSLRNRDVQRGAWL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01900 695 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Bva08g01900 695 PANTHER SERINE-THREONINE PROTEIN KINASE 2 642 - -
Bva08g01900 695 MobiDBLite consensus disorder prediction 577 652 - -
Bva08g01900 695 MobiDBLite consensus disorder prediction 612 626 - -
Bva08g01900 695 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 2 642 - -
Bva08g01900 695 Gene3D Transferase(Phosphotransferase) domain 1 239 523 - -
Bva08g01900 695 SUPERFAMILY Protein kinase-like (PK-like) 266 539 IPR011009 -
Bva08g01900 695 ProSiteProfiles Protein kinase domain profile. 237 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01900 695 Pfam Protein tyrosine and serine/threonine kinase 269 509 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01900 Bva-Chr8 12764636 12767900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01900 268 517 MAP Kinase Kinase Kinase AT1G14000 32.812 1.57e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Bva08g01900 PK_Tyr_Ser-Thr 4.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01900 - - lang:109336839 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01900 08 12764636 12767900 Bva08g01900 08 12764636 12767900 ECH