Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01889 ATGGGAAACAGTGAGGAAGGGAAGCCCACAAAGGCTGAAAAACCATCTTCACCTGTCACAACGGATCAAGCCAATCAGACCAACCAGACCAATGTTCATGTCCATCCTGATTGGGCTGCCATGCAGGCATACTACGGGCCAAGAGTCACCATGCCACCATACTACAACTCTGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGAGCACCTTATGCAGCAATCTATTCACATGGAGGTGTTTATGCTCACCCTGCCGTTCCTATTGCTGGAACTCCTTTAAAAGTGGAGACACCAACCAAATCATCTGGAAATAATGATCAGAGtttattgaagaaattgaaagggTTTGATGGGCTTGCAATGTCAATAGGCAATGGCAATGCTGAGTGTGCTGATCGCGGAGCTGAAAATGGGCTGTCGCAGAGTGTGGATACCGAGGGTTCTACTGATGGAAGTGATGGCAATACTGCTGGGGCTAATCaaataagaaggaaaagaagccGTGAGGGAACACCTAGCACTGGTACGACTCCGTTCTTTACCAAGTGCCATACGGTCTTAACCACTTTATCAAATGGAGATGGGAAAACTGAGATACAAGCCAGCCCAGTTTCCAAAGAGGCTGTGGCTTCAAATAAGATGATGTCAGTTACCCCTGGCAGTGTTGGAGGAAAAATGGTTGGTTCTGTAGTTTCTTCGGGTATGGCCACAGCACTGGAGCTGAGGAACCCTCATAAGACAAGTCCTTCAAGCGTCCCACAACCTTGTGCTGTAGTGCCTTCTGAAGCCTGGTTGCAGAATGACCGTGaggtaaaaagagaaaggaggaAACAATCAAATCGTGAATCTGCTAGAAGGTCCAGACTAAGAAAGCAGGCTGAGACGGAAGAACTTGCAAGAAAAGTTGAATCATTGACTGCTGAGAATGTGGCGCTGAGATCAGAAATAAATCGATTAACTGAAAGTTCTGGGAAACTGAGGGCAGAAAACGGAACATTAATGgaaaaactgaaaaatgcACAAATGGGGCAAACGGAAGAGATAGCTTTGAACAGCATTGATAACAAGAGAGCTACACCTGTAAGCACCGAAAACTTATTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCTGAGGACGAGAATGATTTTTGTGACAACAATCCAAGCTCTGGCACAAAGCTGCATCAACTACTGGACACTAGTCCTAGAGCTGATGCTGTAGCAGCTAGCTG 1280 0.4398 MGNSEEGKPTKAEKPSSPVTTDQANQTNQTNVHVHPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGAPYAAIYSHGGVYAHPAVPIAGTPLKVETPTKSSGNNDQSLLKKLKGFDGLAMSIGNGNAECADRGAENGLSQSVDTEGSTDGSDGNTAGANQIRRKRSREGTPSTGTTPFFTKCHTVLTTLSNGDGKTEIQASPVSKEAVASNKMMSVTPGSVGGKMVGSVVSSGMATALELRNPHKTSPSSVPQPCAVVPSEAWLQNDREVKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENVALRSEINRLTESSGKLRAENGTLMEKLKNAQMGQTEEIALNSIDNKRATPVSTENLLSRVNNSSSNDRTAEDENDFCDNNPSSGTKLHQLLDTSPRADAVAAS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01889 426 Coils Coil 301 335 - -
Bva08g01889 426 MobiDBLite consensus disorder prediction 399 413 - -
Bva08g01889 426 MobiDBLite consensus disorder prediction 151 174 - -
Bva08g01889 426 Pfam Disordered region downstream of MFMR 119 266 - -
Bva08g01889 426 MobiDBLite consensus disorder prediction 282 306 - -
Bva08g01889 426 Gene3D - 284 337 - -
Bva08g01889 426 MobiDBLite consensus disorder prediction 1 33 - -
Bva08g01889 426 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Bva08g01889 426 MobiDBLite consensus disorder prediction 364 426 - -
Bva08g01889 426 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Bva08g01889 426 Pfam bZIP transcription factor 282 343 IPR004827 GO:0003700|GO:0006355
Bva08g01889 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Bva08g01889 426 MobiDBLite consensus disorder prediction 364 388 - -
Bva08g01889 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Bva08g01889 426 PANTHER G-BOX-BINDING FACTOR 3 1 426 - -
Bva08g01889 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 426 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva08g01889 426 MobiDBLite consensus disorder prediction 14 33 - -
Bva08g01889 426 MobiDBLite consensus disorder prediction 145 193 - -
Bva08g01889 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Bva08g01889 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01889 Bva-Chr8 12716944 12722165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01889 1 425 bZIP Transcription Factor Family AT2G46270 50.112 1.83e-119 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva08g01889 MFMR_assoc 2.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01889 K09060 - gmx:778133 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01889 08 12716944 12722165 Bva08g01889 08 12716944 12722165 ECH