Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01866 ATGGATGATGACACTCTATCCTTTAATCACATGTCCTCTTTCTCCGATCCCCCCATCGCCTCCGCCACCATGCCGGCTTCCTCCTTCGACAGGTTTTCCTTCTTCCTTGTCTTGGTCGGTTGCTTACTGTGCTATTGTTATTTCTGCCACCGCATTGAACAAAATGGCAGCGGCTGGTACCCGAATGTTAACGGCAACGGCGCCGGGCTAGATGAGAACACAATCAACTCTTACCCGAAACTTAAGTACAAGAAAGACGGCATGGGTGATAATGATAAAAACGACACATTATGTTCGGTGTGTCTTTGTGAATACGAGGAGTCGGAAATGCTGAGGATGATGCCGGAATGTAGACATTACTTCCACGTTTATTGCCTGGATAAATGGCTCACGCTTAATGGCTCGTGTCCTGTTTGTCGAAACAGGCCGGTGCAACAATCTTA 443 0.4763 MDDDTLSFNHMSSFSDPPIASATMPASSFDRFSFFLVLVGCLLCYCYFCHRIEQNGSGWYPNVNGNGAGLDENTINSYPKLKYKKDGMGDNDKNDTLCSVCLCEYEESEMLRMMPECRHYFHVYCLDKWLTLNGSCPVCRNRPVQQS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01866 147 Pfam Ring finger domain 98 140 IPR001841 -
Bva08g01866 147 PANTHER RING-H2 FINGER PROTEIN ATL67 68 145 IPR044289 GO:0016567|GO:0016740
Bva08g01866 147 SUPERFAMILY RING/U-box 74 142 - -
Bva08g01866 147 SMART ring_2 98 139 IPR001841 -
Bva08g01866 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 144 IPR013083 -
Bva08g01866 147 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01866 Bva-Chr8 12610002 12610445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01866 36 140 C3H Transcription Factor Family AT5G17600 38.655 1.16e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01866 - - ath:AT3G61550 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01866 08 12610002 12610445 Bva08g01866 08 12610002 12610445 ECH