Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01863 ATGGAAAGCCAAGACCCACAAAACCCAACACCACTGCCACCACCGCCATTACTATTGCAGCCGCAAAGCCCTTCCTTGCTCTTCTCACCGCCATTGCCGGCGGCACTGTCGATGTTGCAACCTCCTTTGGACCTTCAAGGGCTGCCTGATATTGACTGGGTTAGCCTTTTCTCTGGCCAAAACGGCTTGCTAGGCAGTAAGCCTGGAATTGAATgtgctgctgctgcttcttcatcttcttctttaatGGCTGAAAACGAGGACGAGAAGGGCaataaggagaaaagaaagggaggTAGAATGAAGAAGACAACTCGTCCCAGGTTTGCGTTTCAGACGAGAAGCGCAGATGATATTCTTGACGATGGCTATCGTTGGAGAAAATATGGGCAGAAAGCTGTGAAGAATAGCATATATCCCAGGtttgtttg 431 0.4292 MESQDPQNPTPLPPPPLLLQPQSPSLLFSPPLPAALSMLQPPLDLQGLPDIDWVSLFSGQNGLLGSKPGIECAAAASSSSSLMAENEDEKGNKEKRKGGRMKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIYPRFV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01863 143 Pfam WRKY DNA -binding domain 121 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01863 143 ProSiteProfiles WRKY domain profile. 115 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01863 143 SUPERFAMILY WRKY DNA-binding domain 113 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01863 143 MobiDBLite consensus disorder prediction 7 21 - -
Bva08g01863 143 MobiDBLite consensus disorder prediction 1 26 - -
Bva08g01863 143 Gene3D WRKY domain 107 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01863 143 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 141 IPR044810 GO:0003700
Bva08g01863 143 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 46 141 - -
Bva08g01863 143 MobiDBLite consensus disorder prediction 75 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01863 Bva-Chr8 12599107 12599538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01863 98 141 WRKY Transcription Factor Family AT2G46130 70.455 6.59e-18 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g01863 WRKY 5.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01863 - - gmx:100810669 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01863 08 12599107 12599538 Bva08g01863 08 12599107 12599538 ECH