Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01854 ATGGTGTCTGTGAACCCAAACCCAGCTCAAGGGTTTTACTTGTTCGATCCCATGAATATGGGTCTTCCTGGTGTCAATCCTCTGCCACCGCCAACGGTAGCTGCTCCGGCCAGCGCCACGGCTTCATCGACGACGGCAACGAATGCCACATCCAATACGCCATCGTACATGGAGGATCCAAGTAAGAAGATCCGAAAACCGTATACGATTACCAAGTCTAGAGAGAGCTGGACAGAGCAGGAGCACGACAAGTTTCTCGAAGCTATCCAATTATTTGATCGTGACTGGAAGAAGATTGAAGCATATGTTGGGTCAAAAACTGTTATCCAGATACGAAGTCATGCTCAGAAGTATTTTCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCCCCTCCTCGCCCGAAGAGAAAAGCTGCTCATCCATACCCACAAAAGGCCCCTAAAAATACTCCTGCTGTATCCCAAGTTACTGGGCAATTACAACCTCCATCTACTTTCATTGAACCTGCATACATTTATAGGCCAGATTCTTCATCTGCTGTTGGAACTCCAGTTTCCAGTGTGCCTTTATCATCTTGGAGTTATAATGCTCTGCATCCCGTCAGTGTACCACAAGTGAATAAAGATGACATGGGATTGGCTGGCCAGTCTGTTCCTCTTAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCCAGGGCATGGCCAAGTAGCAAAGGGACAGATCAAGGGGAACAGGCTAAGCCAATGAAAGTAATGCCGGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCGAACACAACAGGTCACTTACATAGACTTAAGCAAATGGACCCAATAAATTTGGAAACGGTATTGCTATTAATGAGAAATCTTGCCATCAATTTGATGAGTCCTGAGTTTGAGGATCATAGGAGGTTGCTTTCAACATACGAACCCGTGTCTGAGAAGGCAAAATCTGGTAGTCTTTACAGCAATCCTCTGACCGAAAAATCCGAGAGTGCTATTCTATCTGCCTA 1037 0.4513 MVSVNPNPAQGFYLFDPMNMGLPGVNPLPPPTVAAPASATASSTTATNATSNTPSYMEDPSKKIRKPYTITKSRESWTEQEHDKFLEAIQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNTPAVSQVTGQLQPPSTFIEPAYIYRPDSSSAVGTPVSSVPLSSWSYNALHPVSVPQVNKDDMGLAGQSVPLNCCYSSSNESTPRAWPSSKGTDQGEQAKPMKVMPDFAQVYSFIGSVFDPNTTGHLHRLKQMDPINLETVLLLMRNLAINLMSPEFEDHRRLLSTYEPVSEKAKSGSLYSNPLTEKSESAILSA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01854 345 Gene3D - 77 124 - -
Bva08g01854 345 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Bva08g01854 345 MobiDBLite consensus disorder prediction 125 159 - -
Bva08g01854 345 PANTHER SWI/SNF COMPLEX-RELATED 2 340 - -
Bva08g01854 345 ProSiteProfiles SANT domain profile. 72 125 IPR017884 -
Bva08g01854 345 CDD SANT 76 119 IPR001005 -
Bva08g01854 345 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 121 IPR006447 GO:0003677
Bva08g01854 345 SMART sant 73 121 IPR001005 -
Bva08g01854 345 MobiDBLite consensus disorder prediction 36 58 - -
Bva08g01854 345 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Bva08g01854 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Bva08g01854 345 PANTHER MYB TRANSCRIPTION FACTOR 2 340 - -
Bva08g01854 345 MobiDBLite consensus disorder prediction 33 64 - -
Bva08g01854 345 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01854 Bva-Chr8 12527228 12531739 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g01854 Myb_DNA-binding 3.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01854 - - gmx:778090 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01854 08 12527228 12531739 Bva08g01854 08 12527228 12531739 ECH