Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01844 ATGGGCTTTCCAGTTGGATACACCGAAGTTTTCTTCCCGAATCTCTTCCTCCACACTCTCTCCGTTCTGGCTTTCATCCGCAACCTCATTTTCTCGCTCTTTCACTTTCTGGGTCTCTCCGATTTCTTCGAAACCGAGGTCGTTTGGTCCGAATCCCACGCAGGGGTACCCGAAAGCCCGTCGGTGTCGGCGGTCCTGATCCGGGAGTTCCTGCCAGTCATCAAATTCGGCGAGCTCGTGACGGCGGCAGGAGCGGAGTACACGCCGGAAAGTTGCGCCGTTTGTCTGTACGAGTTCGAGGGCGATGAAGAAATCAGGTGCTTGACGAACTGCAAGCACATTTTCCACCGGGCTTGTCTGGACCGTTGGTTGGATCATGATCAGAAAACGTGTCCTTTATGTAGGACCCCTTTTGTGCCTGATGATATGCAAGATGAGTATAATCAACGGCTATGGGCTGCTTCTGGAGTTACTGATTTCTACGGAGAGTACACTTCGGTTTG 503 0.5229 MGFPVGYTEVFFPNLFLHTLSVLAFIRNLIFSLFHFLGLSDFFETEVVWSESHAGVPESPSVSAVLIREFLPVIKFGELVTAAGAEYTPESCAVCLYEFEGDEEIRCLTNCKHIFHRACLDRWLDHDQKTCPLCRTPFVPDDMQDEYNQRLWAASGVTDFYGEYTSV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01844 167 SUPERFAMILY RING/U-box 91 141 - -
Bva08g01844 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 143 IPR013083 -
Bva08g01844 167 Pfam Ring finger domain 91 135 IPR001841 -
Bva08g01844 167 PANTHER BRH1 RING FINGER PROTEIN 1 164 - -
Bva08g01844 167 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
Bva08g01844 167 SMART ring_2 92 134 IPR001841 -
Bva08g01844 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 164 - -
Bva08g01844 167 CDD RING-H2 92 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01844 Bva-Chr8 12450497 12451195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01844 1 158 C3H Transcription Factor Family AT1G63840 50.617 5.91e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01844 K16281 - zju:107432943 294.664