Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01840 ATGTCAAGGCCGAGTGCATACGCCAGCCGCCGGAATTCCAACTCCGGCGGCCCCAGGAGCACTCCGGACTGCTTTGCCTACTCCTCCAGCTTCGCCTCTTCTGAGGTCAGCACTGTCAAGTCAAACTCAGGCCGGAACCCAGTGGCTGCCGCCGCCAGGTTCTTGATCGAGAGTTTCGTTGCTTGCTTCGCCCCGCCGGAGACGAACAACTCCAAGAGCTTCGTGGAGTCTGATCCTCCTTCTGTTGCGTCGGATGCTTCGGGAGGTGGTAGTAGGAGACCGCGGGTCAGTATCACTTCATCTAACTCAACCCAGAACAACGAGCCTAGCAATTTGAGATTCACCTTGAAGGAAATCTTCCAAGCTACAAGGAACTTCTCCCCTGCTTTCAAGATTGGCCAAGGTGGTTTTGGGACAGTCTACAAGGCCAAACTCCAGGATGGAACTGTTGTGGCACTGAAGCGTGCTAAGAAGAGTGTATACGATAAGCATTTGGGCGTGGAATTCCAAAGTGAGATCCAAACACTATCACGGATAGAACATTTAAATTTGGTGAAGTTCTATGGATATTTGGAGGAAGGAGATGAAAGAATTGTTGTCGTGGAGTATGTTCCCAATGGAACCCTAAGAGAACATTTAGATTGCGTTCATGGCAACATTCTGGATCTTGCTTCTCGGTTAGACATTGCAACTGATGTGGCTCATGCTATCACTTATCTTCATCTGTATATGGATCATCCTATCATTCATAGGGACATAAAATCTTCCAACATTCTTCTCACAGAAAACTTCCGAGCTAAGGTAGCTGACTTTGGTTTTGCAAGGCAAGCGCCTGATAGTGATTCTGGTGTGACACATGTATCCACCCAAGTTAAAGGAACTGCTGGCTACTTGGATCCTGAATACCTGAAAACTTACCAACTAACTCAGAAGAGTGACGTATATTCATTTGGCGTTTTGCTCGTTGAAATAGTTACAGGAAGACGTCCCATTGAACCAAAACTTGAACTCAAGGAGCGAATAACTGCAAAGTGGGCTATGAAGAGGTTTAGCGACGGAAATTCCATCTCAGTCTTGGACCCAAGACTAGATCCTACTACAGCAAATACTCTGGCCCTAGAGAGGATACTAGAACTAGCTTTGCAGTGTTTGGCTCCTCGAAGACAAAGCAGACCCAATATGAAGAAATGTGCAGAGATTCTTTGGACCATCCGGAAGGATTACAGAGAGCATGCAGCCTCATTGTCACGTTCATATTCCACTTCTTCACAAAGGAGTGCTTCGTTAAAAGATTA 1295 0.4672 MSRPSAYASRRNSNSGGPRSTPDCFAYSSSFASSEVSTVKSNSGRNPVAAAARFLIESFVACFAPPETNNSKSFVESDPPSVASDASGGGSRRPRVSITSSNSTQNNEPSNLRFTLKEIFQATRNFSPAFKIGQGGFGTVYKAKLQDGTVVALKRAKKSVYDKHLGVEFQSEIQTLSRIEHLNLVKFYGYLEEGDERIVVVEYVPNGTLREHLDCVHGNILDLASRLDIATDVAHAITYLHLYMDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGVTHVSTQVKGTAGYLDPEYLKTYQLTQKSDVYSFGVLLVEIVTGRRPIEPKLELKERITAKWAMKRFSDGNSISVLDPRLDPTTANTLALERILELALQCLAPRRQSRPNMKKCAEILWTIRKDYREHAASLSRSYSTSSQRSASLKD 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01840 431 Gene3D Phosphorylase Kinase; domain 1 89 203 - -
Bva08g01840 431 MobiDBLite consensus disorder prediction 1 22 - -
Bva08g01840 431 PANTHER RECEPTOR-LIKE PROTEIN 55 4 419 - -
Bva08g01840 431 SUPERFAMILY Protein kinase-like (PK-like) 102 405 IPR011009 -
Bva08g01840 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Bva08g01840 431 ProSitePatterns Protein kinases ATP-binding region signature. 132 158 IPR017441 GO:0005524
Bva08g01840 431 CDD STKc_IRAK 132 401 - -
Bva08g01840 431 ProSiteProfiles Protein kinase domain profile. 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01840 431 SMART serkin_6 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01840 431 Pfam Protein kinase domain 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01840 431 Gene3D Transferase(Phosphotransferase) domain 1 204 427 - -
Bva08g01840 431 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 4 419 - -
Bva08g01840 431 MobiDBLite consensus disorder prediction 70 109 - -
Bva08g01840 431 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01840 Bva-Chr8 12424613 12427694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01840 113 427 Receptor kinase-like Gene Family AT1G30570 42.857 8.67e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bva08g01840 Pkinase 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01840 - - gmx:100792034 600.897