Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01838 ATGTCACTGCTCAGAACCTTTTCCTGCTTACTACCCATCACTTTCTTCCTATCGTTACCTATAGTGAACACCCCTCATACAGTTTCTGCTTCTGATTTTGAAGCAAACGGAGCCATTTCCTCAAATTTCACCACCACTGATAGAAAGGAACTCCTCTTTCAGCTCAGGCCAGAGTATGCGAGCTCTGGTTCTAAAGGAACCGTTTTTAGCAGAGGCAAGAAACTGGAATCCTACCCCGTTATAATAAGAGGAAGTGAAACAATTTCCAGTGAGAATCAAAGTTTCGAGCTTGGGTTTTTCAACATCAACGTTGGCGAATCCAGCTGGTACTTGGCAATTCGGTATGCAGCTGTTTCAATTCCCACTTACGTCTGGGTCGCTAATCGAGACCGACCCAGTAAAAATCTCACTCAATCGACGCTGGAATTTACGGAAAGTGGTCGATTAGCTATGAAAGATTCAGAAATTTCGATACTTTGGCAGAGCACAAACACGGAATCTTCGAAAGTGCTCGAGCTTatggaaaatggaaacttGGTTTTGCTTACCTCCAAAGGTTATCTCTCGTGGCAGAGCTTCGACCACCCTACAGACACATGGTTACCAGGCATGAGTCTGACCCGTGAACGGTTCCTGGTATCGTGGCGGACCCCAATGGACCCTTCACCGGGCCTTTACTCTCTCCGGCTGAAACCACCGGATTTCGGCGAGTTCGAGCTCGTGTTTAACAACACCAAACCATATTGGAGCACCGGCCATTGGACGGGCAAGCAATTCCTTAACGTGCCGGAAATGACAAATCAGTACCTTTACCACTTCTATTTCACCGACCCATTCACTCAAACGGCGTCGTTTGAGTTCTCCGAGACGGCACTAGAAAACGGGTTGAGGCCACCTACGTTGTTTCGGGTGGAGTCTTCTGGTCAGGTCCGACAATATACGTGGTGGCTGCAGACAGGTAGCTGGAACAAGTTCTGGACGCGACCCGAATATGTTTGTCAAGTTTATGGACTATGTGGGAATTTCGGAGTCTGTAATGGTGAAACCTCAAAGTGTGATTGTGTTTCTGGGTTCAAACCAGCTAACAATAGTGAATGGGCATCCGATGACTATTCCGGCGGTTGTCGCTGGGAAAATGATGAAACTTGCAAAAAAAGTGATGGGTTTAAAGATATGGGCACTGTGAGCTTTGAAGGAGCTACTTCACAATCGTTTCCAAGTCAGTCTAGAAGTAAATGTGAAACTTCTTGCTTAGATACTTGCCTCTGTATTGGTTTATCTTTCAATGAAAAGACTGGTTTGTGCAAGAATTTTTATGGGtctcttttaaatattaggAATTCAAGTTCTGTGGGTTCTGAGGATGCATTTTTTGTTAGGGTGGAGAAAGGGGGAAGTGTAAAGAAGGGTGTAAGTTTTGTAGTTTTGACTGCTATAGTTATTGGATCAATTGCTTTATTGGGTGTAGTACTATTGACATTGTTGGTCTTGCTCAAAAGAAGgcaaaagaagagaatgaaagaTGATGAACCGTTTCCTGTGTTGAATTTGCATGTGTTTTCTTACAAGGAGCTTCAATTGGCAACCCGGGGATTTTCAGAGAAAGTCGGGCATGGTGGGTTTGGGACAGTGTTTCAAGGGGAATTAGCAGATTCTAGTCTTGTTGCTGTGAAACGTTTGGAGAGGCCTGgaaggggagagagagaattcCGGGCTGAAGTGTGCACAATTGGGAACATTCAACATGTTAATCTTGTGAGGTTAAGAGGGTTTTGCTCAGAAAATTCTCACAGGCTTTTGGTTTATGACTACATGCCTCGTGGTGCCTTGAGTGCTTATCTTCGCAAAGAGGGGCCTTGTTTGAGCTGGGATGTTAGGTTCAGGGTAGCAATCGGAACAGCCAAAGGCATAGCATATTTACACGAAGAATGTAGAGATTGCATTATCCATTGTGATATTAAACCTGAAAACATCCTTTTGGATACTGATTTCACTGCAAAAGTTTCGGATTTTGGTTTAGCCAAGCTCATGGGCAGGGACTTCAGCCGGGTTTTGGCCACCATGAGAGGTACTTGGGGCTATGTGGCACCAGAGTGGATTTCTGGTGTGGCAATTACCACAAAGGCCGACGTGTACAGCTATGGCATGACATTGTTAGAACTAATTGGCGGTCGAAGAAACGTGGAAGCTCCTCCATCTGCCGGTGGTAGAGAGAGTGGAGGCGAGGAGGGGGAGAAGTGGTTCTTTCCTCCCTGGGCGGTGCAGAAGATGATTGAGGACAATGTGGAAGCTGTGGTTGATAAGAGGCTTGgaaatgcatataatatagACGAGGCTAGGAGGTTGGCATTGGTGGCAGCGTGGTGTGTTCAGGATGAGGAGGGAATGAGACCTACAATGGGGATGGTGGTGAAGATGTTAGAGGGACTAGTGGCAGTCAATGTTCCTCCACCGCCGAAGTTGCTACAAGCATTGGTTTCCGGGGAGTCCTTTCATGGGGTTAAGGCCGATTCTGGCCACACCGGCGGCAGTGATAATGTCCAAGTTTCAACTGCTGTTGCAGACTCATTTATAGGGAGTGTTTCTTCCCCAGTATATGTTAATTTCAATGTCCATTG 2618 0.4469 MSLLRTFSCLLPITFFLSLPIVNTPHTVSASDFEANGAISSNFTTTDRKELLFQLRPEYASSGSKGTVFSRGKKLESYPVIIRGSETISSENQSFELGFFNINVGESSWYLAIRYAAVSIPTYVWVANRDRPSKNLTQSTLEFTESGRLAMKDSEISILWQSTNTESSKVLELMENGNLVLLTSKGYLSWQSFDHPTDTWLPGMSLTRERFLVSWRTPMDPSPGLYSLRLKPPDFGEFELVFNNTKPYWSTGHWTGKQFLNVPEMTNQYLYHFYFTDPFTQTASFEFSETALENGLRPPTLFRVESSGQVRQYTWWLQTGSWNKFWTRPEYVCQVYGLCGNFGVCNGETSKCDCVSGFKPANNSEWASDDYSGGCRWENDETCKKSDGFKDMGTVSFEGATSQSFPSQSRSKCETSCLDTCLCIGLSFNEKTGLCKNFYGSLLNIRNSSSVGSEDAFFVRVEKGGSVKKGVSFVVLTAIVIGSIALLGVVLLTLLVLLKRRQKKRMKDDEPFPVLNLHVFSYKELQLATRGFSEKVGHGGFGTVFQGELADSSLVAVKRLERPGRGEREFRAEVCTIGNIQHVNLVRLRGFCSENSHRLLVYDYMPRGALSAYLRKEGPCLSWDVRFRVAIGTAKGIAYLHEECRDCIIHCDIKPENILLDTDFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPSAGGRESGGEEGEKWFFPPWAVQKMIEDNVEAVVDKRLGNAYNIDEARRLALVAAWCVQDEEGMRPTMGMVVKMLEGLVAVNVPPPPKLLQALVSGESFHGVKADSGHTGGSDNVQVSTAVADSFIGSVSSPVYVNFNVH 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01838 872 ProSiteProfiles PAN/Apple domain profile. 383 462 IPR003609 -
Bva08g01838 872 SMART blect_4 79 196 IPR001480 -
Bva08g01838 872 SUPERFAMILY alpha-D-mannose-specific plant lectins 109 254 IPR036426 -
Bva08g01838 872 Gene3D - 73 194 IPR036426 -
Bva08g01838 872 Gene3D Phosphorylase Kinase; domain 1 496 604 - -
Bva08g01838 872 Pfam D-mannose binding lectin 122 210 IPR001480 -
Bva08g01838 872 SMART serkin_6 530 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01838 872 PIRSF SRK 51 856 IPR024171 GO:0004674
Bva08g01838 872 CDD B_lectin 80 196 IPR001480 -
Bva08g01838 872 Gene3D Transferase(Phosphotransferase) domain 1 605 815 - -
Bva08g01838 872 Pfam S-locus glycoprotein domain 249 361 IPR000858 GO:0048544
Bva08g01838 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Bva08g01838 872 ProSiteProfiles Protein kinase domain profile. 530 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01838 872 SUPERFAMILY Protein kinase-like (PK-like) 512 808 IPR011009 -
Bva08g01838 872 CDD STKc_IRAK 536 810 - -
Bva08g01838 872 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 70 860 - -
Bva08g01838 872 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 70 860 - -
Bva08g01838 872 ProSiteProfiles Bulb-type lectin domain profile. 73 194 IPR001480 -
Bva08g01838 872 CDD PAN_AP_plant 382 461 - -
Bva08g01838 872 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Bva08g01838 872 Pfam Protein kinase domain 533 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01838 Bva-Chr8 12414431 12417781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01838 520 817 Receptor kinase-like Gene Family AT5G20050 48.232 4.06e-84 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva08g01838 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01838 - - lja:Lj0g3v0252549.1 1092.03