Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01814 ATGCGCAAGAACATCAAAACACAGCTAGCTGTTGCAGTGAGGAGTATTCAATGGAGCTATGGGATTTTCTGGTCATATTCAACCACCAAAGGGGCACTGGAGTGGGGTGATGGCTACTACAATGGAGACATCAAGACAAGAAAGACAGTGCAATCCATGGGACTAAAGGCTGACAAAATAGTCTTACAGAGAAGTGAGCAACTGAGAGAACTCTACAAGTTTCTTCTTGAAGGTGAAACTGACCCACAAGCTAAAAGGCCTTCTGCTGCATTATCCCCAGAAGATCTCACAAATTTAGAATGGTATTACTTGGTTTGCATGTGCTATGAATCAGGACCCAATGAAAGTCTTCCAGGACGTGCGCTAGAGAGTGGTGAAACAGTGTGGTTATGTAATGTTCAGCATGCAGATAGCAGAGTTTTCTCTCGTTCTTTGCTAGCAAAGACTGTGGCATGTTTTCCCTGTCTGGGAGGCGTAATTGAGATAGGAACTACTGAGCTGGTCTCAGAGGACCTCAGTCTCGTTCAACACGTTAAGGCTTGCTTCTTGAACTTCTCAAAACCTACTTGCTATTACAAATCCTCCTCTGCTCTGAATAAATCAGATGATGATAAAGATCCTAGAAGAACCAAAGTCGAAAATGGCATTTCATGCAGAATGGCTTTGGGGAACGATGGCTGTGTGCACCCCCATTGCCAGGTTGAAGACTCCATGCTTGAGGGTATCAATGGTGCTCAAGATTCTTTGGCTTCTGGGGATTGTATATCTGATGCTTTAAAGAATCAACATGAGGAACATAAAAATGTGAGCCAAATTCTATTTAGGGAACTTCAAGACTGCAATCACTCAAAACTAAGCTCCCTGAACAGTGGACATGATGAAGATTTGAACTACACAAGAaccctttcttctcttttattaggGAATTCATCTATGTCCAAAGGATCGTACACCAGTGATTGTGGTTACAGATCCAGTTTTACAAGATGGAAGAGAGGAAGAATTTCTGAATGGCCAAGGCCAAAGATGTCTGAGAATATATTGTTTACAGTTCCTCGAATGCATAGCAGTTTCTTCTCTCCCATGTCACTAGAGGAAGATGAAAAGATAGAATTGCCTAGTAAGTTGGGAAACGATTACAATTGCATTGGAAATGTTTTGTCtgataaaagaagagaaaataaaaactttcaGGTTCTCAAGTCCATGGTTTCTTCTATAAATGAGATATCAGATAACAGTAACAACAGAAAGAGGAAGGCTTTTGATATTGATGAGTCAGACACAGAATCAAATAGAATTGCTCCCAAGGAAGGGGCTCCATTGGATGTGAAAGTGAACATGAAGGAGGAAGAGctttggCTTCTAGCATCGAAAGTCTTCAAGGAAGGAGGAGATAAAGGCACCAACGCCTGGGAGGGAACTGTTTCAAATGGTGTTCAGCTAACCAcacttcaaattcaaatctgGGAAATAAAAGGTTTGAGCGATTTGACCATAGATTCTGGGGCAAAGATGGACATCTCGTCCAGCTTTGAAGAAAGTTTGGATCAATCAGCCAATGAAACTCCTGGGTACTCCCCTTTTAGTGGTGATTCTTTTGCACACTGCAGAACTAGCTCTGTGACTTCAAATTTCTCAGAGCATGTTGATGATTATAGCTATGCTAGTGATCCTTCACCTTCTCGGTGGTCCAACGTAAGACCGGCAGCCAATCTAGCTGTTCTTTCCAGGCTAGGAATGAAACAGCGCCAGCAAAACTCAGATGATAAACTTGATGACATTGAACTCATTGCTGCAGAACTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTGTTGGGGGAAGACATGTCTGGTGGTGGAAAAGGTGTCTGCACTGCAGTTACAATCTCAAATTCCATTACCAACCTCTATGCAACTGTATTTGGCCAAAACTTGAAGCTGGAGCCTTTGAAGCCTGAGAAGAAGGCAATGTGGAAAAGAGAAATGGCTTGTCTTCTATCAGTATGTGACTACATAGTAGAATTTGCCCCAACTAAACAATCATTACAAGATGGCACTATTGTGGAGATGATGGCGAGTAGACCGAGGACAgatatttacatcaatctccCAGCTCTGCAGAAGCTTGACACAATGCTCTTGGAAATATTAGATAGTTTTGAGGATAGTGAATTTTGGTATGCCGAACAAGGGAGCATATCAGGGAATTCTGGTCGTTCGCGTGCAAGCTCGTTTCGGAGGATTTTTCAGCGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTACCTGGTGGCCTCTCTGAGAAGTCAAGGAAGCACTTGAGAGAGAAACGCGACTGCGCAAATCAAATTCACAAAGCAGCCATGGCAATAAACAGCAGCATTCTTTCTGAGATGGATATCCCAGAAACATATATAGCTAGTCTTCCCAAGAGTGGAAGAGCAAGTCTGGGAGATACAATTTACCGGTATATGCATACTGCTAGCAAATTCTCACCAGCCTACCTACTTGACTGCCTCAATATAAGTTCTGAACACGAAGCTCTGGAAATAGCAGACAAGGTTGAAGCTTCAATGTTCACTTGGAGGCGAAAAGCTTGTCTTAGCCATTCAAAATCTTCGTGGAACAAAGTTAAGGAACACATGTCTGAAACCGAACGAAGTGACAAAAACTACATTTTAGCTGAGAGAGCAGAGAGCATGTTGTTTAGCTTGAAGCAAAGATATCCTGAACTTTCACAAACTACCTTGGACACATGCAAGATTCAATTCAACAGGGATGTTGGGAAAGCAACACTGGAAAGCTACTCAAGAGTATTAGAAGGCCTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTAGTACagataatttaatgaaaaaccGAGAAGTATA 2912 0.4083 MRKNIKTQLAVAVRSIQWSYGIFWSYSTTKGALEWGDGYYNGDIKTRKTVQSMGLKADKIVLQRSEQLRELYKFLLEGETDPQAKRPSAALSPEDLTNLEWYYLVCMCYESGPNESLPGRALESGETVWLCNVQHADSRVFSRSLLAKTVACFPCLGGVIEIGTTELVSEDLSLVQHVKACFLNFSKPTCYYKSSSALNKSDDDKDPRRTKVENGISCRMALGNDGCVHPHCQVEDSMLEGINGAQDSLASGDCISDALKNQHEEHKNVSQILFRELQDCNHSKLSSLNSGHDEDLNYTRTLSSLLLGNSSMSKGSYTSDCGYRSSFTRWKRGRISEWPRPKMSENILFTVPRMHSSFFSPMSLEEDEKIELPSKLGNDYNCIGNVLSDKRRENKNFQVLKSMVSSINEISDNSNNRKRKAFDIDESDTESNRIAPKEGAPLDVKVNMKEEELWLLASKVFKEGGDKGTNAWEGTVSNGVQLTTLQIQIWEIKGLSDLTIDSGAKMDISSSFEESLDQSANETPGYSPFSGDSFAHCRTSSVTSNFSEHVDDYSYASDPSPSRWSNVRPAANLAVLSRLGMKQRQQNSDDKLDDIELIAAELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMACLLSVCDYIVEFAPTKQSLQDGTIVEMMASRPRTDIYINLPALQKLDTMLLEILDSFEDSEFWYAEQGSISGNSGRSRASSFRRIFQRKDEKWWLPVPCVLPGGLSEKSRKHLREKRDCANQIHKAAMAINSSILSEMDIPETYIASLPKSGRASLGDTIYRYMHTASKFSPAYLLDCLNISSEHEALEIADKVEASMFTWRRKACLSHSKSSWNKVKEHMSETERSDKNYILAERAESMLFSLKQRYPELSQTTLDTCKIQFNRDVGKATLESYSRVLEGLAFNIVAWIEDVLSTDNLMKNREV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01814 970 ProSiteProfiles PRONE domain profile. 592 970 IPR005512 GO:0005085
Bva08g01814 970 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 506 814 - -
Bva08g01814 970 Gene3D PRONE domain, subdomain 1 834 970 - -
Bva08g01814 970 Gene3D PRONE domain, subdomain 1 595 833 - -
Bva08g01814 970 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 506 814 IPR038937 GO:0005085
Bva08g01814 970 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 814 970 IPR038937 GO:0005085
Bva08g01814 970 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 601 966 IPR005512 GO:0005085
Bva08g01814 970 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 182 IPR025610 -
Bva08g01814 970 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 814 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01814 Bva-Chr8 12228330 12235186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01814 3 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 38.298 2.30e-77 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01814 - - gmx:100785956 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01814 08 12228330 12235186 Bva08g01814 08 12228330 12235186 ECH