Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01812 ATGGCAACTGATATGCCGAAGCTGATTGGAACAAGtgaagaagatggagaagaAACGGAAATGGATGTGAAAGAAGAAGgcgatgatgatgaagaaaatggaggTAAGCATGTTGCTGGCTCAGTGATGGCAGAGATTGATGGTGGGATGGTAACTACAAGTGGTAACAACAGATTTCAACATCACCAGCAATTTCAAGAACAAGTAGGCACCCCAGGTGGGGGTACACGAAGATGTAGACCtgtggaagagaaagagagaacaaAGCTAAGGGAGCGGCATCGAAGGGCTATCACTGCAAAAATCTTGGCGGGTTTAAGGAGGCATGGAAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTCATTGCTGCTCTAGCAAGAGAAGCTGGATGGGTGGTTCTTCCAGATGGCACCACTTTTCCTTCAGGATCTCAGGGTCAGAGGCCTGCTGGCGGTGGTACTTCTGCAGTAAACAATTCTTCATCTTCCCACATGGCTTCGCAACAGAATCCACCTGCTTTGAGGGGAGTCGGTTCTGGCAATAGGAGTTCGTCAGAATATAATGCATGTCGAATGAAAGGTGTTTTCGTACCTGGTTCACCACCTTATGATCTATCCTCAGGTTCCAGGTCTCAAACTTCATCCATGATGCGGGATGGAGAAGAACAAAGAGAAGATCATCCTTTGATCATTGGTTCAATGGATAGTGATGAGAAGCAGATGGTTGACATGCACCACCGATTACCAGAGCGTGATTTTGCTGGTACCCCATATATTCCTGTTTATGTGATGCTACCGTTAGGTGTTATTAATATGAAGTGTGAGCTTACTGATCCAGATAGTCTACTAAAGCAGCTAAGGGTTTTGAGATCAATAAATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGGATCGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGGCTCTTTCAGATGGCGCGTGAACTCAAACTTAAGTTGCAGGTTGTGATGTCTTTTCATCAATGTGGAGGCAATTTTGGCAATGACGTCTGTATTCCTTTGCCACATTGGGTTGCTGAAATTGGTAGGAACCATCCTGATATATTTTTCACTGATAGAGAGGGAAGGCGCAACCCTGAATGTCTTTCTTGGGGAATCGATAGGGAGAGGGTTTTAAGGGGTCGGACTGCTATTGAGGTTTATTTTGACTTCATGAGAAGCTTTAGGGTAGAGTTTGATGAGTATTTCGAAGATGGTTTCATCTCCATTATTGAAGTTGGATTAGGTCCATGCGGTGAGCTGAGATACCCATCTTGTCCTGTAAAGCATGGCTGGAGATATCCTGGCATTGGTGAATTCCAGTGCTATGATCAGTATTTATTGAAAAGTCTTAAGAAGGTCGCAGAAGCAAGGGGGCACTCTATTTGGGCTAGAGTACCAGATAATGCTGGTACCTACAATTCTCAGCCTCACGAAACAGGTTTCTTTTGTGATGGAGGTGATTATGACAGCTACTATGGCAGGTTCTTTCTTAGCTGGTACTCTCAGGTTTTAATCGATCATGGAAATTGGGTTCTTTCTCTGGCAAAATTAGCTTTTGAGGGCACATGCATTGCTGCTAAGCTATCAGGTGTTCACTGGTGGTACAAGACAGCCAGTCATGCTGCTGAATTAACTTCCGGGTTCTATAATTCATGCAATCGTGATGGTTATGCTGCAATTATGGCAATGTTGAAGAAGAATGGAGCTAGCTTAAACTTTGCTTGTGCTGACTTGCACACGTTAAACCAGCATGAGGACTTTCCAGAGGCATTTGCAGATCTTGACAGTTTAGTCTGGCAAGTGTTGAATGCTGCATGGGATGTTTGCTTACCAGTTGCCAGTGAGAATGCACATGCTTGCTTAAATAGAAGTAGTTATAACAAGATTTTGGACAATGCCAAGCCCATGAATGATCCAGATGGAAGgcatttttcatcttttacttaCCTGAGGTTGAGTCCACTTCTCATGGAAAGACACAACTTCATAGAGTTTGAACGATTTGTGAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCACGTATA 2096 0.4218 MATDMPKLIGTSEEDGEETEMDVKEEGDDDEENGGKHVAGSVMAEIDGGMVTTSGNNRFQHHQQFQEQVGTPGGGTRRCRPVEEKERTKLRERHRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSGSQGQRPAGGGTSAVNNSSSSHMASQQNPPALRGVGSGNRSSSEYNACRMKGVFVPGSPPYDLSSGSRSQTSSMMRDGEEQREDHPLIIGSMDSDEKQMVDMHHRLPERDFAGTPYIPVYVMLPLGVINMKCELTDPDSLLKQLRVLRSINVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMARELKLKLQVVMSFHQCGGNFGNDVCIPLPHWVAEIGRNHPDIFFTDREGRRNPECLSWGIDRERVLRGRTAIEVYFDFMRSFRVEFDEYFEDGFISIIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLKKVAEARGHSIWARVPDNAGTYNSQPHETGFFCDGGDYDSYYGRFFLSWYSQVLIDHGNWVLSLAKLAFEGTCIAAKLSGVHWWYKTASHAAELTSGFYNSCNRDGYAAIMAMLKKNGASLNFACADLHTLNQHEDFPEAFADLDSLVWQVLNAAWDVCLPVASENAHACLNRSSYNKILDNAKPMNDPDGRHFSSFTYLRLSPLLMERHNFIEFERFVKRMHGEAVLDLHV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01812 698 MobiDBLite consensus disorder prediction 142 186 - -
Bva08g01812 698 PANTHER BETA-AMYLASE 73 697 - -
Bva08g01812 698 MobiDBLite consensus disorder prediction 67 90 - -
Bva08g01812 698 MobiDBLite consensus disorder prediction 202 226 - -
Bva08g01812 698 PRINTS Plant beta-amylase signature 421 430 IPR001371 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Plant beta-amylase signature 679 693 IPR001371 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Plant beta-amylase signature 664 678 IPR001371 GO:0000272|GO:0016161
Bva08g01812 698 Pfam Glycosyl hydrolase family 14 264 682 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 MobiDBLite consensus disorder prediction 1 38 - -
Bva08g01812 698 SUPERFAMILY (Trans)glycosidases 255 694 IPR017853 -
Bva08g01812 698 PANTHER - 73 697 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 Pfam BES1/BZR1 plant transcription factor, N-terminal 75 208 IPR008540 -
Bva08g01812 698 MobiDBLite consensus disorder prediction 15 29 - -
Bva08g01812 698 Gene3D Glycosidases 252 696 - -
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 431 453 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 316 334 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 338 359 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 573 596 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 613 635 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 295 309 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 504 523 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 538 554 IPR001554 GO:0000272|GO:0016161
Bva08g01812 698 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 555 566 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01812 Bva-Chr8 12217439 12223188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01812 1 695 Glycoside Hydrolase AT2G45880 65.665 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bva08g01812 Glyco_hydro_14 1.3e-101 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01812 K01177 - vvi:100246489 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01812 08 12217439 12223188 Bva08g01812 08 12217439 12223188 ECH