Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01779 ATGCCTCGTGGAACGCTTGAAGTTGCTCTGATCAGCGCCAAAGGCGTTGAAAACAATGATTTTCTCTCCAACATAGATCCTTATGTGATTTTCACGTATGGTTCACAGGAGCACAAGAGCACTGTAGCTGAAAACGGAGGATCTAACCCACAATGGAGCCAGACCTTTCTATTCACAGTTTCTGACAGTTCTTCTGAACTCAATCTCAAGATAATggataaagataatttttctagCGATGATTGCCTTGGCGAGGCAACAATTCCTTTAGAAGCAGTGTTTGCTGAGGGCAGCCTCCCTGAAACCGCTCACTGTGTTGTCAAAGACCAAGAGTATTGTGGGGAGATTTGGGTGGCTCTCACTTTCAACCCTGAAACTCAGAGAGGCATTGAGGAGGAGCATTACGGTGGATGGAAAGAATCAGAGATGTA 431 0.4385 MPRGTLEVALISAKGVENNDFLSNIDPYVIFTYGSQEHKSTVAENGGSNPQWSQTFLFTVSDSSSELNLKIMDKDNFSSDDCLGEATIPLEAVFAEGSLPETAHCVVKDQEYCGEIWVALTFNPETQRGIEEEHYGGWKESEM 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01779 143 Pfam C2 domain 4 95 IPR000008 -
Bva08g01779 143 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva08g01779 143 Gene3D C2 domain 2 125 IPR035892 -
Bva08g01779 143 PANTHER C2 DOMAIN-CONTAINING 1 141 - -
Bva08g01779 143 SMART C2_3c 5 102 IPR000008 -
Bva08g01779 143 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 141 - -
Bva08g01779 143 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01779 Bva-Chr8 12050095 12051141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01779 4 94 C2H2 Transcription Factor Family AT4G05330 34.066 1.10e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01779 - - gmx:100500006 209.534